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RDR3902 (Gibberella zeae PH-1) |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 |
>RDR3902 | Gibberella zeae PH-1 | transcript sequence | RNA-dependent RNA polymerases
ATGCTATCCT ACAGTGAACC GGTACCCCGA CGGGATATGG TTGATTCGCT GCCAGTTCGT ATGCATAGAC CACGTTCTGG CCCTGGGACT GAGAGCTCTG TTGGAAGACA TTCAGCGTAT CGTACAACCA ACCAGGCCAC AAACACTACT CGTCAGTTTG ACCGTCCTCC TTCTCAGTCC GACTTGGGAT TTCTGCCGAT GGAGAACATG AACCCAACAC TATCTGAATC CAGAAAATTG ATATTTGAAG CTATGATTTG CGACGATGGG TACTCTACAA AGTCGTCACC TCACGACGAT GACAGCGATG GCTCGGAATA TTCTGTATCG TCTTCTTTGG CAGATGCAAT GGCGCAGGTT TGGAATAGTA GTGATAGCTC ACAGCAGCAT CAAGTGCCGA GAAAGCAACC TGATGCTGTC AGTGATCAAT CTGCACAAAC GAAAGAGCAC AATATCCTGC CATATTCAGT ACTTATGGGA AGCTTGGCAA CTATATGGCC AAGCTGCCCA CCGGAGATGG ACCATGCGCC TCAAATAGTC AAGTGGGAGA TGCATCGTAT CGCGCACCAT TGTTCCGTTA CATTGGAAAA TACCTCGGTG CAGTACACTC CAGCTTGGGA AGACCAAACT TTGTTTCGTG ATGCTATGAA GGAAATGCGC TGTTTCAAAG GGAAATCATT TCCAGAACCG TGCGATGCAC AAGTCTGGCA CGAAGGCTTT ACCGATAGTT TTCAACCCAG TGAAGCCGTG ATTTTCAAGG CACTGCTTCA TTTGGATCTC AAAGCTGGAG ATGTGAGGCT CAACTTTGAA ATTCCAACAT TAGACAAACG CTGCAGACTC CGTCGGAAAT TTGCCTCTGA CAGATTCGTC GATCTCCGGT TGTTGATCAC AAATCGGCCC GGGGCTGACA ATCTAGAAAA AGCATTAGCA AGATGGTTCG TGAACAGCCG TCATATGTTC CTTTCTCGCG AATGGGCGGC GTTCTTTATT GATGATGTCA AGAAAAAGAC TACAAGCGCA GCAGCTGAAC GGGGTTTCAC TGAAGAACAA CAAGTGATAC TTTTTGCAGA ACGAGGCCTT AGCATTGGGC CATACGTAGT AAGGCCTGCA ACGCTCACTG AAGCCCAACC ACCGGTCATG GCTCTGCGTA ACTACCAGTT CGACAAAAGA TCACCCACGG GCAACGTAAT GAATGATGGC ATTGGGAGAG TGTCTCTTGC TCTCATGAGA AAGGTCCAGA ATGCTCTTCA ACTTGATTAT CTGCCAGCGG CCATACAAGG CAGAATAGGC AGCGCTAAAG GGCTCTGGGT CCTTGACATA GGAACTCAAC CGTCTGAGAT ATGGCTCGAA ACATACGAAT CACAGAGGAA ATGGAATTGC GATTGGAAAG ACCCTGAGCA CCGAACTCTA GAGGTTCTAT CTCAATCATC GGACCTGAAA ACAGCAACCT TGAATCACCA ATTCATCTCG ATTCTGGAAA GTCGATCCGT CGACCGACGC AACACACGAG CAGCGATGGT CAAGCATATG AAAATTAATC TACAAACGAG TCTAGACCAT GCCAAAGAAT CAATGAAACA GCCTGAGCTA TTCAGAAAGT GGATTCATGA GACGTCCTAT GCCAGTTATG GGGGGAGGAA CGAATCCTGG TTTATCGGGG GGTTACCAAA AAGTTGGGCA GAACAAATGA GCTTCCTGTC AGATGGAGGA TTTGAACCCC TTCATCTACG GTATTTGCAC AATCTCACTA CCAACCACAT GGAGTCACAG TGGAAGAATA CGAAAGAGAA GATGAGAATC GAGATTAGTC AGTCGACATG GGCGCTCATG GTAGTGGACT TTCAGGGAGT CCTAGGACCC GATGAAGTCC AGTTATGCTT CTCAAGTCCT TTTAACGACG GCTTTGAAAA ACGATACGAT CTTGAGGGTT TCGATGTTAT TGTTGCGAGG TGTCCGGCGC ATCTACCAAG CGATATCCAA AAGGTCAAGG CGGTTTTCAA GCCAGAGCTC CGCCACTTGA AAGACGTCGT CGTATTCCCT TTTGTTGGAC AAGAGCCGCT CGCTGGCAAA CTCTCGGGGG GTGACTACGA TGGCGATAAA GCTTGGATAT GCTGGGACGC AGACATTGTC GACAACTTTC GAAATTCCGA AGTGCCTCAA AAACCGTCTT TCAACGGGTA TTTCGAAGCA AACGATCATA CAGTTGAGTC TCTTATCTTG AAGCACGGCA AATCCCACTA TTTGGACTAT TTACTAGAAG AGGCTTTCAC GTTTCACCTG ACTCCCAAGC TAGTCGGCCT TTGTACGAAT TACAAAGAGA GGTTAGCGTA CGACAAAAAC AGTATCGAGG ATCCGTCTGT TATAAACATG AGTTGGCTCC TAAGCGCTTT GGTTGATCAG CCAAAGAGTG GGTTCACATT CAATAAGAAA ATTCTGCAAC GATTTCAGAA GGAATACTGT GAAAATCAGG TTGACCTGAA GCAACCGGCT TACAAAAAGG GTACCATTGG AAGAATTTCT AAACCGTGCC ACATTTTTGA TTTCCTCAAA TACAAAATGC AAGAAATCAT TCATCAGGGG CTAAGCGACC TTTACCAGTA CCGATCAAGC CAGAATGGAG ACAGTGGTAC CTTGGATGTG CCTACGTTTG ACAAAGATCT CGCTTCTTAC TGGAATGAAT TTGAAGCTGA AGCAATGAAT CTGATCCATC AGCAAGATTC AGGCTCAGAC TGGCTTTCAG ACATGCGGTC GAATCTCAAA AGAGACATAG ATACATGTCA TTCATACTGG GTCGAATTAA TATCTGGCCG AAATGGGAAA GTTAATTATT TGGCTAAAGT TGCTTCTGTG CACGAAAGAT GGGTTTCTAT ATCGCCACAG ATTGCCAAGA GGTCTGCTGT TACAGAAGCA GTAATCTGTA CCCTAACCAG GCCATCGACT CACTCGCCAC AGCTACAAAC TTGGCAGCTT CTCAAAGCAA GCCTGACTTT CAAACTGTAC CATAAAACTG ACAAGTTCTT GTGGTGCATT GCAGGTCGTC AACTTCAGTT TATCAAAGCT TCCAAAGCCG GGGCACCGAT TCCAGTTACA CCAAGAACAT ATAAGGTGTT GCGGCCAGAT GGTAAGCGGA TTCATCAGTC TTGTGTCAAC GAAGACCAAA TGGTAGCGGA GGATAACGGT TTTGGGAGCT CGAGAAACAG CATTGGCGTT TTTCCGCCAC CTCCTCCCAC CAACTACTAG |
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 |
>RDR3902 | Gibberella zeae PH-1 | orf sequence | RNA-dependent RNA polymerases
ATGCTATCCT ACAGTGAACC GGTACCCCGA CGGGATATGG TTGATTCGCT GCCAGTTCGT ATGCATAGAC CACGTTCTGG CCCTGGGACT GAGAGCTCTG TTGGAAGACA TTCAGCGTAT CGTACAACCA ACCAGGCCAC AAACACTACT CGTCAGTTTG ACCGTCCTCC TTCTCAGTCC GACTTGGGAT TTCTGCCGAT GGAGAACATG AACCCAACAC TATCTGAATC CAGAAAATTG ATATTTGAAG CTATGATTTG CGACGATGGG TACTCTACAA AGTCGTCACC TCACGACGAT GACAGCGATG GCTCGGAATA TTCTGTATCG TCTTCTTTGG CAGATGCAAT GGCGCAGGTT TGGAATAGTA GTGATAGCTC ACAGCAGCAT CAAGTGCCGA GAAAGCAACC TGATGCTGTC AGTGATCAAT CTGCACAAAC GAAAGAGCAC AATATCCTGC CATATTCAGT ACTTATGGGA AGCTTGGCAA CTATATGGCC AAGCTGCCCA CCGGAGATGG ACCATGCGCC TCAAATAGTC AAGTGGGAGA TGCATCGTAT CGCGCACCAT TGTTCCGTTA CATTGGAAAA TACCTCGGTG CAGTACACTC CAGCTTGGGA AGACCAAACT TTGTTTCGTG ATGCTATGAA GGAAATGCGC TGTTTCAAAG GGAAATCATT TCCAGAACCG TGCGATGCAC AAGTCTGGCA CGAAGGCTTT ACCGATAGTT TTCAACCCAG TGAAGCCGTG ATTTTCAAGG CACTGCTTCA TTTGGATCTC AAAGCTGGAG ATGTGAGGCT CAACTTTGAA ATTCCAACAT TAGACAAACG CTGCAGACTC CGTCGGAAAT TTGCCTCTGA CAGATTCGTC GATCTCCGGT TGTTGATCAC AAATCGGCCC GGGGCTGACA ATCTAGAAAA AGCATTAGCA AGATGGTTCG TGAACAGCCG TCATATGTTC CTTTCTCGCG AATGGGCGGC GTTCTTTATT GATGATGTCA AGAAAAAGAC TACAAGCGCA GCAGCTGAAC GGGGTTTCAC TGAAGAACAA CAAGTGATAC TTTTTGCAGA ACGAGGCCTT AGCATTGGGC CATACGTAGT AAGGCCTGCA ACGCTCACTG AAGCCCAACC ACCGGTCATG GCTCTGCGTA ACTACCAGTT CGACAAAAGA TCACCCACGG GCAACGTAAT GAATGATGGC ATTGGGAGAG TGTCTCTTGC TCTCATGAGA AAGGTCCAGA ATGCTCTTCA ACTTGATTAT CTGCCAGCGG CCATACAAGG CAGAATAGGC AGCGCTAAAG GGCTCTGGGT CCTTGACATA GGAACTCAAC CGTCTGAGAT ATGGCTCGAA ACATACGAAT CACAGAGGAA ATGGAATTGC GATTGGAAAG ACCCTGAGCA CCGAACTCTA GAGGTTCTAT CTCAATCATC GGACCTGAAA ACAGCAACCT TGAATCACCA ATTCATCTCG ATTCTGGAAA GTCGATCCGT CGACCGACGC AACACACGAG CAGCGATGGT CAAGCATATG AAAATTAATC TACAAACGAG TCTAGACCAT GCCAAAGAAT CAATGAAACA GCCTGAGCTA TTCAGAAAGT GGATTCATGA GACGTCCTAT GCCAGTTATG GGGGGAGGAA CGAATCCTGG TTTATCGGGG GGTTACCAAA AAGTTGGGCA GAACAAATGA GCTTCCTGTC AGATGGAGGA TTTGAACCCC TTCATCTACG GTATTTGCAC AATCTCACTA CCAACCACAT GGAGTCACAG TGGAAGAATA CGAAAGAGAA GATGAGAATC GAGATTAGTC AGTCGACATG GGCGCTCATG GTAGTGGACT TTCAGGGAGT CCTAGGACCC GATGAAGTCC AGTTATGCTT CTCAAGTCCT TTTAACGACG GCTTTGAAAA ACGATACGAT CTTGAGGGTT TCGATGTTAT TGTTGCGAGG TGTCCGGCGC ATCTACCAAG CGATATCCAA AAGGTCAAGG CGGTTTTCAA GCCAGAGCTC CGCCACTTGA AAGACGTCGT CGTATTCCCT TTTGTTGGAC AAGAGCCGCT CGCTGGCAAA CTCTCGGGGG GTGACTACGA TGGCGATAAA GCTTGGATAT GCTGGGACGC AGACATTGTC GACAACTTTC GAAATTCCGA AGTGCCTCAA AAACCGTCTT TCAACGGGTA TTTCGAAGCA AACGATCATA CAGTTGAGTC TCTTATCTTG AAGCACGGCA AATCCCACTA TTTGGACTAT TTACTAGAAG AGGCTTTCAC GTTTCACCTG ACTCCCAAGC TAGTCGGCCT TTGTACGAAT TACAAAGAGA GGTTAGCGTA CGACAAAAAC AGTATCGAGG ATCCGTCTGT TATAAACATG AGTTGGCTCC TAAGCGCTTT GGTTGATCAG CCAAAGAGTG GGTTCACATT CAATAAGAAA ATTCTGCAAC GATTTCAGAA GGAATACTGT GAAAATCAGG TTGACCTGAA GCAACCGGCT TACAAAAAGG GTACCATTGG AAGAATTTCT AAACCGTGCC ACATTTTTGA TTTCCTCAAA TACAAAATGC AAGAAATCAT TCATCAGGGG CTAAGCGACC TTTACCAGTA CCGATCAAGC CAGAATGGAG ACAGTGGTAC CTTGGATGTG CCTACGTTTG ACAAAGATCT CGCTTCTTAC TGGAATGAAT TTGAAGCTGA AGCAATGAAT CTGATCCATC AGCAAGATTC AGGCTCAGAC TGGCTTTCAG ACATGCGGTC GAATCTCAAA AGAGACATAG ATACATGTCA TTCATACTGG GTCGAATTAA TATCTGGCCG AAATGGGAAA GTTAATTATT TGGCTAAAGT TGCTTCTGTG CACGAAAGAT GGGTTTCTAT ATCGCCACAG ATTGCCAAGA GGTCTGCTGT TACAGAAGCA GTAATCTGTA CCCTAACCAG GCCATCGACT CACTCGCCAC AGCTACAAAC TTGGCAGCTT CTCAAAGCAA GCCTGACTTT CAAACTGTAC CATAAAACTG ACAAGTTCTT GTGGTGCATT GCAGGTCGTC AACTTCAGTT TATCAAAGCT TCCAAAGCCG GGGCACCGAT TCCAGTTACA CCAAGAACAT ATAAGGTGTT GCGGCCAGAT GGTAAGCGGA TTCATCAGTC TTGTGTCAAC GAAGACCAAA TGGTAGCGGA GGATAACGGT TTTGGGAGCT CGAGAAACAG CATTGGCGTT TTTCCGCCAC CTCCTCCCAC CAACTACTAG |
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 |
>RDR3902 | Gibberella zeae PH-1 | protein sequence | RNA-dependent RNA polymerases
MLSYSEPVPR RDMVDSLPVR MHRPRSGPGT ESSVGRHSAY RTTNQATNTT RQFDRPPSQS DLGFLPMENM NPTLSESRKL IFEAMICDDG YSTKSSPHDD DSDGSEYSVS SSLADAMAQV WNSSDSSQQH QVPRKQPDAV SDQSAQTKEH NILPYSVLMG SLATIWPSCP PEMDHAPQIV KWEMHRIAHH CSVTLENTSV QYTPAWEDQT LFRDAMKEMR CFKGKSFPEP CDAQVWHEGF TDSFQPSEAV IFKALLHLDL KAGDVRLNFE IPTLDKRCRL RRKFASDRFV DLRLLITNRP GADNLEKALA RWFVNSRHMF LSREWAAFFI DDVKKKTTSA AAERGFTEEQ QVILFAERGL SIGPYVVRPA TLTEAQPPVM ALRNYQFDKR SPTGNVMNDG IGRVSLALMR KVQNALQLDY LPAAIQGRIG SAKGLWVLDI GTQPSEIWLE TYESQRKWNC DWKDPEHRTL EVLSQSSDLK TATLNHQFIS ILESRSVDRR NTRAAMVKHM KINLQTSLDH AKESMKQPEL FRKWIHETSY ASYGGRNESW FIGGLPKSWA EQMSFLSDGG FEPLHLRYLH NLTTNHMESQ WKNTKEKMRI EISQSTWALM VVDFQGVLGP DEVQLCFSSP FNDGFEKRYD LEGFDVIVAR CPAHLPSDIQ KVKAVFKPEL RHLKDVVVFP FVGQEPLAGK LSGGDYDGDK AWICWDADIV DNFRNSEVPQ KPSFNGYFEA NDHTVESLIL KHGKSHYLDY LLEEAFTFHL TPKLVGLCTN YKERLAYDKN SIEDPSVINM SWLLSALVDQ PKSGFTFNKK ILQRFQKEYC ENQVDLKQPA YKKGTIGRIS KPCHIFDFLK YKMQEIIHQG LSDLYQYRSS QNGDSGTLDV PTFDKDLASY WNEFEAEAMN LIHQQDSGSD WLSDMRSNLK RDIDTCHSYW VELISGRNGK VNYLAKVASV HERWVSISPQ IAKRSAVTEA VICTLTRPST HSPQLQTWQL LKASLTFKLY HKTDKFLWCI AGRQLQFIKA SKAGAPIPVT PRTYKVLRPD GKRIHQSCVN EDQMVAEDNG FGSSRNSIGV FPPPPPTNY |
Acknowledgements: ChromDB was funded by a grant from the National Science Foundation Plant Genome Research Project(#DBI-0421679; PI Napoli). ChromDB is funded currently by a Mexican grant to R. Jorgensen via the Consejo Nacional de Ciencia y Tecnología (Conacyt). ChromDB server is hosted by the Biotechnology Computing Facility at the University of Arizona.
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