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CHR2117 (Nectria haematococca) |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501 4561 4621 4681 4741 4801 4861 4921 4981 5041 5101 5161 5221 5281 5341 5401 5461 5521 5581 5641 5701 5761 5821 5881 5941 6001 6061 6121 6181 6241 6301 |
>CHR2117 | Nectria haematococca | genomic sequence | CHD1 subclass
ctgcctcgca ttctgagaat ccgcccgtca cctcttcacc cacgttaccc ccgttccgtc ctccgatccc gccaagcacc cccggtgaag cttccgatac atctagatgt tggttgccgc ctggatgtca ttctttaatg acttgtaagt ttccctcatc cttcccgctt cccccttgcc gctgccgcct tgctggcttg ctggcccgtc gcctgttgtc gatcccgcct cgactcctgc catctccatc gcgatattgc tcccatagag tcgtatataa gcgataccgt gcttcccttt gatggattcg atgcttctcg ctcattcgga tgcccctgcg accccgtacc cgacaccgtg gccacccagg cttcccaatt gcgatgtcgg gttttcatca gccttgccat ctacaacgca cgcgggatgc gacaagtgaa ccatctccat cgttgttcgc gtttccgggc gcttttggca ccgttcctgg gtcgccagag tcgcctcgtt ccgttaatcc ctcaaccgca cctgctggcc cagaacattg gctaacatcg tcgcgtctca tagcaggtag cctctgccat cgccatcatg ATGTCCACCC CTACTTTTGG GGGTCCTTCC AATGGACATT TATCTCCAGA TAATCAAATC AGCATGTCGT TCGATACAGG CGACAACGCA ACCGATAGCG ACTCCCCTGA TGTCCACGAT CATACGCTTG ACCATCCATC ACCGTCACCC TCGGACGATG TGAACGAGAC CTCGAATATG GCACAGGACG ACACACATAT GTCAGAGAGT GAACCTTCCA GCGAGGACAA CGCGTCCGAG GACGGTGACT TTGACATGGA GGAGAGCCTG CCATCTCAGA ATGACGACGC GGTTGAGGAC CGCGCCAGCT CCACAGACTC GAACAGAGCC TCGAAACGCA AAGTGCCCAT TGAGGAGGAC GAGTATATCA AGGCCAATCC AGAACTCTAT GGATTGAGAC GAAGTgtaag aagcgaaaaa ttttcaccgc catcttcttg gctgaccggc acttgcagAC TCGACCTCGA GAACAACGTA AAATCGTACg tagtcatccc gaatctatct cgaggagCGT TATTGACCAA GTCGCGACAG GTCGAGTCCG ATGACTCCGA ATCCGAACCT CCCGTCAGCC GTCGTACGGT CAAACGACGA CGTGTAGAAA CATCCCTTCC TTgtaagcac cccctttctc ctgattctac tcgatcgttg cgactcggac taacacggtc atccagCTTC CAAGATAGGT ACACCAACAT TACGAGCGTC AACAAACGAC TCCGACTCCG ACTCAGACAC ATACGGCGGC GCGCGCGCCA AGAGTCTTCA GAAGAAGGCT CGGCTGCAAC GCGAGGCCCA GCCCTCTCTC GCATACGCCG AAAAGCGCTG GTCAAGTCGT CGCGCCGCGC AGGTACAACA AGGAGCTTAT GAAGAGAGCG ACTTTGACGA AGAAGAAGAC GAGGATGACC TCGCCCCTTC CAACTACGTC GTTGACTATG TCGACGATTC CCCATACGTG GAAAAAGTAG TGCGGTATCG CCCGATAAAC GGGCAGGACT TGACCTATGA CATGACCAAA GGTGATTTTG AATACTTCAT CAAATGGCAG GGCAAGTCTC ACTTGCATGA CACCTGGGAA ACACTCGACG ACCTTCGCAA TGTTCGCGGA TTTAGAAAGG TCGAGAATTA CTTCAAGAAG TTCGTTGACT ACGAGCTGGA CATCCGCTTT GGCGACGACA TTCCTCCCGA GACCAAGGAG CAGTTCTTCC TTGACCGCGA ACGAGACGAC GAGGCCTACG AGGATTACAT CAAGGTTGAG CGAGTGGTTG CTACAAGAGA CGGTGAAGAC GGCGACGAGT ACCTTGTCAA ATGGAAGGGC CTCACCTACG AGGAGTGCAC CTGGGAGGCT GCAGCGGACA TCAGCGACAT GTTCCAGGAC CAGATTGACC AATACCTTGA CCGCGCCTCT CGTTCATGGC AGTCGGACCG CAAGGAAACC AGCCTCGACT CACGGTCAAG GATGGTCAAG TTGGAAAAGC AGCCTGACTA CATCGTAGGC GGCGAACTTC GGTCGTTCCA GCTGAGAGGT CTTAACTTCC TCTGCCTCAA CTGGTGCAGA GGTAACAATG TGATTCTCGC CGATGAGATG GGTCTCGGCA AGACAGTCCA GACCGTGTCA TTCCTCAGCT GGCTGCGCAA CGCTCGCCAC CAGGAGGGAC CTTCACTTGT GGTTGCTCCT CTCAGTGTCA TCCCCGCCTG GTGTGATACT TTCAACACCT GGTCCCCAGA CCTTAACTAC GTCGTTTATC TGGGACCTGA AGATGCCCGA AACATCATTC GCGAGCACGA GCTTCTCGTG GATAACAACC CGAAGAAGCC CAAGTTCAAC ATCCTGGTCA CCTCGTATGA GTTCATCCTC CAGGACTGGC AGTTCTTGCA GTCCATCAAG TGGCAGACCC TTGCCGTCGA CGAGGCGCAT CGTCTCAAGA ACCGTGAATC CCAACTGTAC AGCCGCTTGG TGAGCTTTGG TATCCCGTGC AAGGTCTTGA TCACCGGAAC ACCCATCCAA AACAACCTAG CCGAGTTGTC AGCCCTGCTC GACTTCTTGA ACCCGGGCAA GGTGGCCATT GATGAGGATC TTGACTCTCT ATCTGCCAAC GATGCGCAAG AAAAGCTTCA GCAACTCCAC AAGGCCATTG CTCCTTTCAT TTTGCGAAGA ACCAAAGAAA CTGTCGAATC CGATCTTCCA CCCAAGACTG AGAAGATCAT CCGCGTTGAG CTGTCAGATG TCCAACTGGA CTACTACAAG AACATCCTCA CTCGCAACTA CACTGCCCTC TGTGATGCGA CCAACGGTCA CAAGAACTCT TTGCTGAACA TCATGATGGA GCTCAAGAAG ATCAGCAACC ATCCATATAT GTTCCCAGGT GCCGAGGAAA AGGTGCTCGC CGGCAGCGTT CGTCGCGAAG ACCAGATCAA GGGCTTGATT GCCAGCAGTG GAAAGATGAT GCTTCTTGAC CAGCTTCTCT CCAAGCTCAA GAAGGACGGC CACAGAGTCT TAATTTTCAG CCAGATGGTC AAGATGCTTG ACATTCTTGG TGACTACCTC TCCCTACGAG GGTACAAGTT CCAGAGATTA GATGGAACCA TCGCAGCCGG ACCCCGACGC ATGGCCATCA ATCATTTCAA TGCCGACGAC AGCGATGACT TTTGCTTCCT TCTCTCGACC AGAGCAGGTG GTCTAGGTAT CAACCTGATG ACTGCCGACA CTGTTGTCAT CTTTGATTCC GACTGGAACC CACAGGCCGA CTTGCAAGCC ATGGCCAGAG CCCACCGTAT CGGTCAGAAG CGACCCGTGA ACATCTATCG TCTTGTTTCC AAGGAAACAG TCGAGGAAGA AGTTCTTGAA CGAGCACGCA ACAAGCTCCT GCTTGAGTAT CTGACGATTC AGGCTGGTGT CACGGACGAT GGCAAGGCTG CATTCAAAGA AGAGCTCAAT AAGAAGGGTC TCAAGGTCGA TGGGCCCTCT TCATCTGAAG ACATTCAGAT GGTCTTGAAG ATGCGTTCAT CTAAGATGTT TGAGCAGAGC GGCAACCAAG AACGCCTGGA GCAACTCGAC ATCGACTCGA TCCTGGAGAA CGCTGAAGTC ACCAAGACCA AGGTTGACGA CAAGATCAAC CTCAGTAGTG GTGGCATTGA TTGGGACAAC TTCATGCAGA TCACGGATGT CAAGGTGGAC GACCTTAATC TCGACTGGGA TCAGATTATT CCTGCTGAAA AGCTTGCCGA AATCAAGGCA GACGAAGAAC AGCGGCGACA CGAGGACTAT CTTGCCCAGG TCAAGGCTGA GAGTGCTCCC CGAAGAGCCG TCGTCAAGAG CCGCAACAGG GAAACTGAGC GTGCTGACCG GTTTAAGAAA CGGCAGAAAG AACAGCGAGA AAAGGAAGAG GAAGAGCGAC AGGCCCTGAT CGCGGACCCC AAGAGGCCTT TGACAGACAA GGAGCAGCGT CTTCTCATCA AAGCCTACTT CCGGTTCGGC TCGATGGACG ACCGCGGTGA GGAGATCATC AGAGAGGCCA AGCTCAAGGA AAGAGACCAA GACTATGTCA AGTCGGTTCT TGATGAATTC ATCAAAGCAG CCAAGGAAGC TGTTGATGAC AATTATATCA CCATGGTGGA GGAAGAGAAG AGGCTTGGCA AGACACTCAC CAAGAAGGAT CGCAAGGCTG TTCTGATTGA CTTTGGCGAC CTAAAGAAGA TCAATGCCGA GACGGCCATC GAGCGGCCCA AGCAACTTCA ACTTCTTCGA CAGGTTATCA ACGGGCACAG CGACTGGCGA GCATTCCGTC TTCCCGACGC CACCAAGGCT GCCAACTATT CTTGTTCATG GGGTGCTAAG GAGGATGCCA TGCTCCTGGT TGGCATCGAC AGACACGGCT TTGGTGCTTG GCCTCAGATT CGCGACGACC CTGACCTGGA CATGACGGAC AAGCTCTTCC TGGAAGAGCA TCGTGTCGAG AAGAAGGAGG AGCGTAGCAA GGCCAATGAC AAGATGAAGG CGCCTGGCGC AGTACATCTT GTTCGCCGAT CTGAATACCT GCTCTCAGTC CTGCAAGCGA AGCACTCGAA CGATCGAAGT GTGCAGCGAG CCGTGGAGAA TCACCACCGA AACAACAAGA AGAGTCATCT TGCCAATGGC CACCGCGGAA GTGCTACTGC ATCCCCTGCA CCCCAAGTCA GCAAGAAACA TCGTGACCGT GATCGGGATC ATGCTCATGG CGACCATCGG CCACGCGGCT ATACCGACGA GCGTGGAACT CCAAGGCCCG ACTACAAGCG GAAGCATGTT TCCCATGAGG ACAGCCGGAG CCCCAAGCAT CGCCGGCTGG ATGATCACCg tcgatctggc aagcacggcg acgataggga cagagctgag aagcgtcgac atcgtgatga tgatgaccga agagctgaga agcatcgtca cagccacgga catcgtgatg aacgacgtgg cgaccggcat cgtgatgatc gcgaacgcga ccgtgaccgc gaccgtgagc gagagcgaga gcgagacaga gatcgtgacc gtgaccgtga gcgggatcgt gatcgtgatc gtgaccggga ccgcgagcga gAGCGTGACC GCGATAGGGA TCGTGTGCGC GAGCGACCCC AAGAATCTCG TCCTCAAGAT GAGCGCCGAG CCAAGGCTCT TCGTCGACTG GATGAGCTTA GGCGAATCGG TGACAACAAG GACCAGAGGG ATAAGGATAA CGATGCCATG ATCTGGTTCC TCCTGAAGCC CGTCAGAGAA AATTTCGAAA AGATTCTCTC AACCACCAAG GACAATGTCA AGTCAAGCAA GGAACGAGCC TCCATCTTTG GAGTGGAACT GGTAGTTATT GGCACATTCC TGGACGAAAA ATTGCCGGCT ACCGCTGCGG ACGAGGGTCT CAAGAGCAAC TTTTGgtgag tacagctgca ttgatacagc ctgacctgcg acctggacta acatgcttga tgtagGGACT TTTTGGCAGC GTTGTGGCCA GTCGACGACA CCAGCAAGAG CGTGACAGGC AAGCGACTGA GCAACATGTA TCGTACGCTG CACTCTCGCA ACAAGGGCGG CTCCAGCTCG AACAAGACCA ACGGGGCCTA Atgaatggtc tcatctctca gaagagacct cagctcagca cgacagacag gtctttagag acacttgatt acgaagggaa ggtgaattgt gtttcacagc aactcaacat agcatgtttg ttttcagcat ggttttggcg tttggttgta cagatggatg gcatcatgtt gcacgcaagt acgtgaagcg gagcggagag gctgagatca taccccgttg cattatagga cctgtggtgg aaggagttgt cactgctgct atgctatgct atatggccaa gcttggccaa actgatacat acgaggacag gccttgcctg gctgctaatt cgcatgcctc gcgtctctct taccggagta ggctgtcttc tttttcttgt tttcttcttc ttttcatgca gcacgaccta gaggcaggta ggctatctaa ctcacagctg atgtgatgga tctggccaac tacagagggt cgatgaatgg ctgctcactg ccagggatga aaggcaggca gagcagaggc gaggcgaggc gaggcgtaca ggtgcatgca aatgagccct tgttcttaga tgaaagatgt tttacagggc ctgtggaaaa a |
Transcript Splice Model
601-1005 |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501 4561 4621 |
>CHR2117 | Nectria haematococca | transcript sequence | CHD1 subclass
ATGTCCACCC CTACTTTTGG GGGTCCTTCC AATGGACATT TATCTCCAGA TAATCAAATC AGCATGTCGT TCGATACAGG CGACAACGCA ACCGATAGCG ACTCCCCTGA TGTCCACGAT CATACGCTTG ACCATCCATC ACCGTCACCC TCGGACGATG TGAACGAGAC CTCGAATATG GCACAGGACG ACACACATAT GTCAGAGAGT GAACCTTCCA GCGAGGACAA CGCGTCCGAG GACGGTGACT TTGACATGGA GGAGAGCCTG CCATCTCAGA ATGACGACGC GGTTGAGGAC CGCGCCAGCT CCACAGACTC GAACAGAGCC TCGAAACGCA AAGTGCCCAT TGAGGAGGAC GAGTATATCA AGGCCAATCC AGAACTCTAT GGATTGAGAC GAAGTACTCG ACCTCGAGAA CAACGTAAAA TCGTACCGTT ATTGACCAAG TCGCGACAGG TCGAGTCCGA TGACTCCGAA TCCGAACCTC CCGTCAGCCG TCGTACGGTC AAACGACGAC GTGTAGAAAC ATCCCTTCCT TCTTCCAAGA TAGGTACACC AACATTACGA GCGTCAACAA ACGACTCCGA CTCCGACTCA GACACATACG GCGGCGCGCG CGCCAAGAGT CTTCAGAAGA AGGCTCGGCT GCAACGCGAG GCCCAGCCCT CTCTCGCATA CGCCGAAAAG CGCTGGTCAA GTCGTCGCGC CGCGCAGGTA CAACAAGGAG CTTATGAAGA GAGCGACTTT GACGAAGAAG AAGACGAGGA TGACCTCGCC CCTTCCAACT ACGTCGTTGA CTATGTCGAC GATTCCCCAT ACGTGGAAAA AGTAGTGCGG TATCGCCCGA TAAACGGGCA GGACTTGACC TATGACATGA CCAAAGGTGA TTTTGAATAC TTCATCAAAT GGCAGGGCAA GTCTCACTTG CATGACACCT GGGAAACACT CGACGACCTT CGCAATGTTC GCGGATTTAG AAAGGTCGAG AATTACTTCA AGAAGTTCGT TGACTACGAG CTGGACATCC GCTTTGGCGA CGACATTCCT CCCGAGACCA AGGAGCAGTT CTTCCTTGAC CGCGAACGAG ACGACGAGGC CTACGAGGAT TACATCAAGG TTGAGCGAGT GGTTGCTACA AGAGACGGTG AAGACGGCGA CGAGTACCTT GTCAAATGGA AGGGCCTCAC CTACGAGGAG TGCACCTGGG AGGCTGCAGC GGACATCAGC GACATGTTCC AGGACCAGAT TGACCAATAC CTTGACCGCG CCTCTCGTTC ATGGCAGTCG GACCGCAAGG AAACCAGCCT CGACTCACGG TCAAGGATGG TCAAGTTGGA AAAGCAGCCT GACTACATCG TAGGCGGCGA ACTTCGGTCG TTCCAGCTGA GAGGTCTTAA CTTCCTCTGC CTCAACTGGT GCAGAGGTAA CAATGTGATT CTCGCCGATG AGATGGGTCT CGGCAAGACA GTCCAGACCG TGTCATTCCT CAGCTGGCTG CGCAACGCTC GCCACCAGGA GGGACCTTCA CTTGTGGTTG CTCCTCTCAG TGTCATCCCC GCCTGGTGTG ATACTTTCAA CACCTGGTCC CCAGACCTTA ACTACGTCGT TTATCTGGGA CCTGAAGATG CCCGAAACAT CATTCGCGAG CACGAGCTTC TCGTGGATAA CAACCCGAAG AAGCCCAAGT TCAACATCCT GGTCACCTCG TATGAGTTCA TCCTCCAGGA CTGGCAGTTC TTGCAGTCCA TCAAGTGGCA GACCCTTGCC GTCGACGAGG CGCATCGTCT CAAGAACCGT GAATCCCAAC TGTACAGCCG CTTGGTGAGC TTTGGTATCC CGTGCAAGGT CTTGATCACC GGAACACCCA TCCAAAACAA CCTAGCCGAG TTGTCAGCCC TGCTCGACTT CTTGAACCCG GGCAAGGTGG CCATTGATGA GGATCTTGAC TCTCTATCTG CCAACGATGC GCAAGAAAAG CTTCAGCAAC TCCACAAGGC CATTGCTCCT TTCATTTTGC GAAGAACCAA AGAAACTGTC GAATCCGATC TTCCACCCAA GACTGAGAAG ATCATCCGCG TTGAGCTGTC AGATGTCCAA CTGGACTACT ACAAGAACAT CCTCACTCGC AACTACACTG CCCTCTGTGA TGCGACCAAC GGTCACAAGA ACTCTTTGCT GAACATCATG ATGGAGCTCA AGAAGATCAG CAACCATCCA TATATGTTCC CAGGTGCCGA GGAAAAGGTG CTCGCCGGCA GCGTTCGTCG CGAAGACCAG ATCAAGGGCT TGATTGCCAG CAGTGGAAAG ATGATGCTTC TTGACCAGCT TCTCTCCAAG CTCAAGAAGG ACGGCCACAG AGTCTTAATT TTCAGCCAGA TGGTCAAGAT GCTTGACATT CTTGGTGACT ACCTCTCCCT ACGAGGGTAC AAGTTCCAGA GATTAGATGG AACCATCGCA GCCGGACCCC GACGCATGGC CATCAATCAT TTCAATGCCG ACGACAGCGA TGACTTTTGC TTCCTTCTCT CGACCAGAGC AGGTGGTCTA GGTATCAACC TGATGACTGC CGACACTGTT GTCATCTTTG ATTCCGACTG GAACCCACAG GCCGACTTGC AAGCCATGGC CAGAGCCCAC CGTATCGGTC AGAAGCGACC CGTGAACATC TATCGTCTTG TTTCCAAGGA AACAGTCGAG GAAGAAGTTC TTGAACGAGC ACGCAACAAG CTCCTGCTTG AGTATCTGAC GATTCAGGCT GGTGTCACGG ACGATGGCAA GGCTGCATTC AAAGAAGAGC TCAATAAGAA GGGTCTCAAG GTCGATGGGC CCTCTTCATC TGAAGACATT CAGATGGTCT TGAAGATGCG TTCATCTAAG ATGTTTGAGC AGAGCGGCAA CCAAGAACGC CTGGAGCAAC TCGACATCGA CTCGATCCTG GAGAACGCTG AAGTCACCAA GACCAAGGTT GACGACAAGA TCAACCTCAG TAGTGGTGGC ATTGATTGGG ACAACTTCAT GCAGATCACG GATGTCAAGG TGGACGACCT TAATCTCGAC TGGGATCAGA TTATTCCTGC TGAAAAGCTT GCCGAAATCA AGGCAGACGA AGAACAGCGG CGACACGAGG ACTATCTTGC CCAGGTCAAG GCTGAGAGTG CTCCCCGAAG AGCCGTCGTC AAGAGCCGCA ACAGGGAAAC TGAGCGTGCT GACCGGTTTA AGAAACGGCA GAAAGAACAG CGAGAAAAGG AAGAGGAAGA GCGACAGGCC CTGATCGCGG ACCCCAAGAG GCCTTTGACA GACAAGGAGC AGCGTCTTCT CATCAAAGCC TACTTCCGGT TCGGCTCGAT GGACGACCGC GGTGAGGAGA TCATCAGAGA GGCCAAGCTC AAGGAAAGAG ACCAAGACTA TGTCAAGTCG GTTCTTGATG AATTCATCAA AGCAGCCAAG GAAGCTGTTG ATGACAATTA TATCACCATG GTGGAGGAAG AGAAGAGGCT TGGCAAGACA CTCACCAAGA AGGATCGCAA GGCTGTTCTG ATTGACTTTG GCGACCTAAA GAAGATCAAT GCCGAGACGG CCATCGAGCG GCCCAAGCAA CTTCAACTTC TTCGACAGGT TATCAACGGG CACAGCGACT GGCGAGCATT CCGTCTTCCC GACGCCACCA AGGCTGCCAA CTATTCTTGT TCATGGGGTG CTAAGGAGGA TGCCATGCTC CTGGTTGGCA TCGACAGACA CGGCTTTGGT GCTTGGCCTC AGATTCGCGA CGACCCTGAC CTGGACATGA CGGACAAGCT CTTCCTGGAA GAGCATCGTG TCGAGAAGAA GGAGGAGCGT AGCAAGGCCA ATGACAAGAT GAAGGCGCCT GGCGCAGTAC ATCTTGTTCG CCGATCTGAA TACCTGCTCT CAGTCCTGCA AGCGAAGCAC TCGAACGATC GAAGTGTGCA GCGAGCCGTG GAGAATCACC ACCGAAACAA CAAGAAGAGT CATCTTGCCA ATGGCCACCG CGGAAGTGCT ACTGCATCCC CTGCACCCCA AGTCAGCAAG AAACATCGTG ACCGTGATCG GGATCATGCT CATGGCGACC ATCGGCCACG CGGCTATACC GACGAGCGTG GAACTCCAAG GCCCGACTAC AAGCGGAAGC ATGTTTCCCA TGAGGACAGC CGGAGCCCCA AGCATCGCCG GCTGGATGAT CACCAGCGTG ACCGCGATAG GGATCGTGTG CGCGAGCGAC CCCAAGAATC TCGTCCTCAA GATGAGCGCC GAGCCAAGGC TCTTCGTCGA CTGGATGAGC TTAGGCGAAT CGGTGACAAC AAGGACCAGA GGGATAAGGA TAACGATGCC ATGATCTGGT TCCTCCTGAA GCCCGTCAGA GAAAATTTCG AAAAGATTCT CTCAACCACC AAGGACAATG TCAAGTCAAG CAAGGAACGA GCCTCCATCT TTGGAGTGGA ACTGGTAGTT ATTGGCACAT TCCTGGACGA AAAATTGCCG GCTACCGCTG CGGACGAGGG TCTCAAGAGC AACTTTTGGG ACTTTTTGGC AGCGTTGTGG CCAGTCGACG ACACCAGCAA GAGCGTGACA GGCAAGCGAC TGAGCAACAT GTATCGTACG CTGCACTCTC GCAACAAGGG CGGCTCCAGC TCGAACAAGA CCAACGGGGC CTAA |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501 4561 4621 |
>CHR2117 | Nectria haematococca | orf sequence | CHD1 subclass
ATGTCCACCC CTACTTTTGG GGGTCCTTCC AATGGACATT TATCTCCAGA TAATCAAATC AGCATGTCGT TCGATACAGG CGACAACGCA ACCGATAGCG ACTCCCCTGA TGTCCACGAT CATACGCTTG ACCATCCATC ACCGTCACCC TCGGACGATG TGAACGAGAC CTCGAATATG GCACAGGACG ACACACATAT GTCAGAGAGT GAACCTTCCA GCGAGGACAA CGCGTCCGAG GACGGTGACT TTGACATGGA GGAGAGCCTG CCATCTCAGA ATGACGACGC GGTTGAGGAC CGCGCCAGCT CCACAGACTC GAACAGAGCC TCGAAACGCA AAGTGCCCAT TGAGGAGGAC GAGTATATCA AGGCCAATCC AGAACTCTAT GGATTGAGAC GAAGTACTCG ACCTCGAGAA CAACGTAAAA TCGTACCGTT ATTGACCAAG TCGCGACAGG TCGAGTCCGA TGACTCCGAA TCCGAACCTC CCGTCAGCCG TCGTACGGTC AAACGACGAC GTGTAGAAAC ATCCCTTCCT TCTTCCAAGA TAGGTACACC AACATTACGA GCGTCAACAA ACGACTCCGA CTCCGACTCA GACACATACG GCGGCGCGCG CGCCAAGAGT CTTCAGAAGA AGGCTCGGCT GCAACGCGAG GCCCAGCCCT CTCTCGCATA CGCCGAAAAG CGCTGGTCAA GTCGTCGCGC CGCGCAGGTA CAACAAGGAG CTTATGAAGA GAGCGACTTT GACGAAGAAG AAGACGAGGA TGACCTCGCC CCTTCCAACT ACGTCGTTGA CTATGTCGAC GATTCCCCAT ACGTGGAAAA AGTAGTGCGG TATCGCCCGA TAAACGGGCA GGACTTGACC TATGACATGA CCAAAGGTGA TTTTGAATAC TTCATCAAAT GGCAGGGCAA GTCTCACTTG CATGACACCT GGGAAACACT CGACGACCTT CGCAATGTTC GCGGATTTAG AAAGGTCGAG AATTACTTCA AGAAGTTCGT TGACTACGAG CTGGACATCC GCTTTGGCGA CGACATTCCT CCCGAGACCA AGGAGCAGTT CTTCCTTGAC CGCGAACGAG ACGACGAGGC CTACGAGGAT TACATCAAGG TTGAGCGAGT GGTTGCTACA AGAGACGGTG AAGACGGCGA CGAGTACCTT GTCAAATGGA AGGGCCTCAC CTACGAGGAG TGCACCTGGG AGGCTGCAGC GGACATCAGC GACATGTTCC AGGACCAGAT TGACCAATAC CTTGACCGCG CCTCTCGTTC ATGGCAGTCG GACCGCAAGG AAACCAGCCT CGACTCACGG TCAAGGATGG TCAAGTTGGA AAAGCAGCCT GACTACATCG TAGGCGGCGA ACTTCGGTCG TTCCAGCTGA GAGGTCTTAA CTTCCTCTGC CTCAACTGGT GCAGAGGTAA CAATGTGATT CTCGCCGATG AGATGGGTCT CGGCAAGACA GTCCAGACCG TGTCATTCCT CAGCTGGCTG CGCAACGCTC GCCACCAGGA GGGACCTTCA CTTGTGGTTG CTCCTCTCAG TGTCATCCCC GCCTGGTGTG ATACTTTCAA CACCTGGTCC CCAGACCTTA ACTACGTCGT TTATCTGGGA CCTGAAGATG CCCGAAACAT CATTCGCGAG CACGAGCTTC TCGTGGATAA CAACCCGAAG AAGCCCAAGT TCAACATCCT GGTCACCTCG TATGAGTTCA TCCTCCAGGA CTGGCAGTTC TTGCAGTCCA TCAAGTGGCA GACCCTTGCC GTCGACGAGG CGCATCGTCT CAAGAACCGT GAATCCCAAC TGTACAGCCG CTTGGTGAGC TTTGGTATCC CGTGCAAGGT CTTGATCACC GGAACACCCA TCCAAAACAA CCTAGCCGAG TTGTCAGCCC TGCTCGACTT CTTGAACCCG GGCAAGGTGG CCATTGATGA GGATCTTGAC TCTCTATCTG CCAACGATGC GCAAGAAAAG CTTCAGCAAC TCCACAAGGC CATTGCTCCT TTCATTTTGC GAAGAACCAA AGAAACTGTC GAATCCGATC TTCCACCCAA GACTGAGAAG ATCATCCGCG TTGAGCTGTC AGATGTCCAA CTGGACTACT ACAAGAACAT CCTCACTCGC AACTACACTG CCCTCTGTGA TGCGACCAAC GGTCACAAGA ACTCTTTGCT GAACATCATG ATGGAGCTCA AGAAGATCAG CAACCATCCA TATATGTTCC CAGGTGCCGA GGAAAAGGTG CTCGCCGGCA GCGTTCGTCG CGAAGACCAG ATCAAGGGCT TGATTGCCAG CAGTGGAAAG ATGATGCTTC TTGACCAGCT TCTCTCCAAG CTCAAGAAGG ACGGCCACAG AGTCTTAATT TTCAGCCAGA TGGTCAAGAT GCTTGACATT CTTGGTGACT ACCTCTCCCT ACGAGGGTAC AAGTTCCAGA GATTAGATGG AACCATCGCA GCCGGACCCC GACGCATGGC CATCAATCAT TTCAATGCCG ACGACAGCGA TGACTTTTGC TTCCTTCTCT CGACCAGAGC AGGTGGTCTA GGTATCAACC TGATGACTGC CGACACTGTT GTCATCTTTG ATTCCGACTG GAACCCACAG GCCGACTTGC AAGCCATGGC CAGAGCCCAC CGTATCGGTC AGAAGCGACC CGTGAACATC TATCGTCTTG TTTCCAAGGA AACAGTCGAG GAAGAAGTTC TTGAACGAGC ACGCAACAAG CTCCTGCTTG AGTATCTGAC GATTCAGGCT GGTGTCACGG ACGATGGCAA GGCTGCATTC AAAGAAGAGC TCAATAAGAA GGGTCTCAAG GTCGATGGGC CCTCTTCATC TGAAGACATT CAGATGGTCT TGAAGATGCG TTCATCTAAG ATGTTTGAGC AGAGCGGCAA CCAAGAACGC CTGGAGCAAC TCGACATCGA CTCGATCCTG GAGAACGCTG AAGTCACCAA GACCAAGGTT GACGACAAGA TCAACCTCAG TAGTGGTGGC ATTGATTGGG ACAACTTCAT GCAGATCACG GATGTCAAGG TGGACGACCT TAATCTCGAC TGGGATCAGA TTATTCCTGC TGAAAAGCTT GCCGAAATCA AGGCAGACGA AGAACAGCGG CGACACGAGG ACTATCTTGC CCAGGTCAAG GCTGAGAGTG CTCCCCGAAG AGCCGTCGTC AAGAGCCGCA ACAGGGAAAC TGAGCGTGCT GACCGGTTTA AGAAACGGCA GAAAGAACAG CGAGAAAAGG AAGAGGAAGA GCGACAGGCC CTGATCGCGG ACCCCAAGAG GCCTTTGACA GACAAGGAGC AGCGTCTTCT CATCAAAGCC TACTTCCGGT TCGGCTCGAT GGACGACCGC GGTGAGGAGA TCATCAGAGA GGCCAAGCTC AAGGAAAGAG ACCAAGACTA TGTCAAGTCG GTTCTTGATG AATTCATCAA AGCAGCCAAG GAAGCTGTTG ATGACAATTA TATCACCATG GTGGAGGAAG AGAAGAGGCT TGGCAAGACA CTCACCAAGA AGGATCGCAA GGCTGTTCTG ATTGACTTTG GCGACCTAAA GAAGATCAAT GCCGAGACGG CCATCGAGCG GCCCAAGCAA CTTCAACTTC TTCGACAGGT TATCAACGGG CACAGCGACT GGCGAGCATT CCGTCTTCCC GACGCCACCA AGGCTGCCAA CTATTCTTGT TCATGGGGTG CTAAGGAGGA TGCCATGCTC CTGGTTGGCA TCGACAGACA CGGCTTTGGT GCTTGGCCTC AGATTCGCGA CGACCCTGAC CTGGACATGA CGGACAAGCT CTTCCTGGAA GAGCATCGTG TCGAGAAGAA GGAGGAGCGT AGCAAGGCCA ATGACAAGAT GAAGGCGCCT GGCGCAGTAC ATCTTGTTCG CCGATCTGAA TACCTGCTCT CAGTCCTGCA AGCGAAGCAC TCGAACGATC GAAGTGTGCA GCGAGCCGTG GAGAATCACC ACCGAAACAA CAAGAAGAGT CATCTTGCCA ATGGCCACCG CGGAAGTGCT ACTGCATCCC CTGCACCCCA AGTCAGCAAG AAACATCGTG ACCGTGATCG GGATCATGCT CATGGCGACC ATCGGCCACG CGGCTATACC GACGAGCGTG GAACTCCAAG GCCCGACTAC AAGCGGAAGC ATGTTTCCCA TGAGGACAGC CGGAGCCCCA AGCATCGCCG GCTGGATGAT CACCAGCGTG ACCGCGATAG GGATCGTGTG CGCGAGCGAC CCCAAGAATC TCGTCCTCAA GATGAGCGCC GAGCCAAGGC TCTTCGTCGA CTGGATGAGC TTAGGCGAAT CGGTGACAAC AAGGACCAGA GGGATAAGGA TAACGATGCC ATGATCTGGT TCCTCCTGAA GCCCGTCAGA GAAAATTTCG AAAAGATTCT CTCAACCACC AAGGACAATG TCAAGTCAAG CAAGGAACGA GCCTCCATCT TTGGAGTGGA ACTGGTAGTT ATTGGCACAT TCCTGGACGA AAAATTGCCG GCTACCGCTG CGGACGAGGG TCTCAAGAGC AACTTTTGGG ACTTTTTGGC AGCGTTGTGG CCAGTCGACG ACACCAGCAA GAGCGTGACA GGCAAGCGAC TGAGCAACAT GTATCGTACG CTGCACTCTC GCAACAAGGG CGGCTCCAGC TCGAACAAGA CCAACGGGGC CTAA |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 |
>CHR2117 | Nectria haematococca | protein sequence | CHD1 subclass
MSTPTFGGPS NGHLSPDNQI SMSFDTGDNA TDSDSPDVHD HTLDHPSPSP SDDVNETSNM AQDDTHMSES EPSSEDNASE DGDFDMEESL PSQNDDAVED RASSTDSNRA SKRKVPIEED EYIKANPELY GLRRSTRPRE QRKIVPLLTK SRQVESDDSE SEPPVSRRTV KRRRVETSLP SSKIGTPTLR ASTNDSDSDS DTYGGARAKS LQKKARLQRE AQPSLAYAEK RWSSRRAAQV QQGAYEESDF DEEEDEDDLA PSNYVVDYVD DSPYVEKVVR YRPINGQDLT YDMTKGDFEY FIKWQGKSHL HDTWETLDDL RNVRGFRKVE NYFKKFVDYE LDIRFGDDIP PETKEQFFLD RERDDEAYED YIKVERVVAT RDGEDGDEYL VKWKGLTYEE CTWEAAADIS DMFQDQIDQY LDRASRSWQS DRKETSLDSR SRMVKLEKQP DYIVGGELRS FQLRGLNFLC LNWCRGNNVI LADEMGLGKT VQTVSFLSWL RNARHQEGPS LVVAPLSVIP AWCDTFNTWS PDLNYVVYLG PEDARNIIRE HELLVDNNPK KPKFNILVTS YEFILQDWQF LQSIKWQTLA VDEAHRLKNR ESQLYSRLVS FGIPCKVLIT GTPIQNNLAE LSALLDFLNP GKVAIDEDLD SLSANDAQEK LQQLHKAIAP FILRRTKETV ESDLPPKTEK IIRVELSDVQ LDYYKNILTR NYTALCDATN GHKNSLLNIM MELKKISNHP YMFPGAEEKV LAGSVRREDQ IKGLIASSGK MMLLDQLLSK LKKDGHRVLI FSQMVKMLDI LGDYLSLRGY KFQRLDGTIA AGPRRMAINH FNADDSDDFC FLLSTRAGGL GINLMTADTV VIFDSDWNPQ ADLQAMARAH RIGQKRPVNI YRLVSKETVE EEVLERARNK LLLEYLTIQA GVTDDGKAAF KEELNKKGLK VDGPSSSEDI QMVLKMRSSK MFEQSGNQER LEQLDIDSIL ENAEVTKTKV DDKINLSSGG IDWDNFMQIT DVKVDDLNLD WDQIIPAEKL AEIKADEEQR RHEDYLAQVK AESAPRRAVV KSRNRETERA DRFKKRQKEQ REKEEEERQA LIADPKRPLT DKEQRLLIKA YFRFGSMDDR GEEIIREAKL KERDQDYVKS VLDEFIKAAK EAVDDNYITM VEEEKRLGKT LTKKDRKAVL IDFGDLKKIN AETAIERPKQ LQLLRQVING HSDWRAFRLP DATKAANYSC SWGAKEDAML LVGIDRHGFG AWPQIRDDPD LDMTDKLFLE EHRVEKKEER SKANDKMKAP GAVHLVRRSE YLLSVLQAKH SNDRSVQRAV ENHHRNNKKS HLANGHRGSA TASPAPQVSK KHRDRDRDHA HGDHRPRGYT DERGTPRPDY KRKHVSHEDS RSPKHRRLDD HQRDRDRDRV RERPQESRPQ DERRAKALRR LDELRRIGDN KDQRDKDNDA MIWFLLKPVR ENFEKILSTT KDNVKSSKER ASIFGVELVV IGTFLDEKLP ATAADEGLKS NFWDFLAALW PVDDTSKSVT GKRLSNMYRT LHSRNKGGSS SNKTNGA |
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Acknowledgements: ChromDB was funded by a grant from the National Science Foundation Plant Genome Research Project(#DBI-0421679; PI Napoli). ChromDB is funded currently by a Mexican grant to R. Jorgensen via the Consejo Nacional de Ciencia y Tecnología (Conacyt). ChromDB server is hosted by the Biotechnology Computing Facility at the University of Arizona.
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