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DMT701 (Oryza sativa ssp. japonica) |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501 4561 4621 4681 4741 4801 4861 4921 4981 5041 5101 5161 5221 5281 5341 5401 5461 5521 5581 5641 5701 5761 5821 5881 5941 6001 6061 6121 6181 6241 6301 6361 6421 6481 6541 6601 6661 6721 6781 6841 6901 6961 7021 7081 7141 7201 7261 7321 7381 |
>DMT701 | Oryza sativa ssp. japonica | genomic sequence | CMT1 class (CpNpG)
aagaagacca acagaactga ggatttgagg aaggaaagtg tccgtcactg caagtggggc ccactcggaa gccacgaccc cctcttttgc atgagctgcg gcgagcacgg gcccaccgcc caccgcccct gctctctccg atttccattc caatcttccg cgtcggcacg agaccacGAC GTCACGCATT CCCGCGAATC CGGCCTGCTC GAGACCTCCT CCCGTCGCGA CGCCGCAAGC CATCAAAGCG CCTCCTGCTT CCGCTCCTAT CCAAGGCGAA CCACACTCTG CGATCGAGAG CTCGCTGAGC CGTAAAACCC TAGCTAATCC TTCTCTCTCC CCCCCTCTCG CTGTCGTCTC CGTCTCCGTC TCCGATCTCC GCGGCCTCGG TTGCGGGCTG CGGCTGCGCC GGTGCGGCTC CATGGTCCCG GAGCCGGCTC CCGCGGCGGC GACGGAGCCG AGGCGCTCCA CGCGCAGGCG CCTAATGACG GCCGCCGCGA TGGAGGCCGA GGCGGAGGCG GTGGCCGACC TCGACGAGAT CGACCGCGAG ATGTCGCGCG CCGAGTCGCG CAAGCGCCAG CGCAGGACGG CGAAGGAGAA GCCTGGTGCC CGTAAGGGAG CGACCGAATG GAAGCCGGAG GACGTGGAGA AGGCGGCGGC GGCGGAGGGG GTGGCCGAGC TCGACGAGAT CGACCGCGAG ATGCCGCGCC CCGAGTTGCG CAAGCGCCAG CGCAGGACGG CGAAGGAGAA GCCTAGTGCC CATGAGGGAG CGACCGAATG GAAGCCGGAG GACGTGGAGA AGGCGGCGGC GCAGGAGCCC GAGGGGACCG AGCTCGACAG TGGGTTGTCG CCCGCAGAGT CACGCGGCAA GCGGCAGCGC GGGGTGGAGA AGGTCAAGCG TCGTACCCGT AAGAAGACGG CCAAGGAGAA GACGAAGGAG ACGACCGAGA AGTCGGCGGC TCAGGCGCCC GAGAAGATGA AGGTGAACGA TGCGGGTGGC GCGCTGGCCG AAGACGTGTG CGCGGATGAG CCGGACGCCG AACAGATGGC CATGGAGGAG GAGGAGGAGG CAGCCGACGT GCTGGAAGCA GAGGAGAGGA TGGGTAAGTG TGTCGGAGAA GGATCAGCCG AGAAGGCTGC GACGAGGAAG AGGGTGGCGC GGCCAAGCAC TGCGAGAAGG GTGGAGGACT CAGATGACCA CTTTGTGGGC GATCCAGTAC CGGATGATGA AGCGCGACAA CGATGGCCCG TGAGGTACAG TAGAAAGgta agaatttcta gtaaacctct aactctattc tagagttatc tcctggaata ctaaagtttg ttatcacttc gattttgaga tgattttgaa aaataaaact gacatgctct tttgtttttg ttgcagGGGT CTGATTCGCT TCTTAAGCAG GAgtatgtgt gtttttacgc taacattgtt ctgaaagtac tcttaatctc ttcttatgct gcttttataa tggtgatcag aattttcatt tatgcagGCC TGACGAAGAT GAAGAAATGA AGGCTCGATG TCACTACCTG GCTGCTAATG TGGATGATGA AATCTATCAT CTTGATGATG ATGTCTATGT CAAGgtcagt catgaatatc ttgttcacac ttcttagaac tttattaacc aatgttgttt cctagtttta tgtattgctt ttacgatagc atttttatat gactgactaa caagggatga ttaatgtacc ttttactttc tgccattttt gttttgctct tcattataat tgttattaaa cttattatcc tactatttgt tctactggtt gttaaccacg agatattaag ttttcgatta atttgttggc actcattttg tacgcacgta aattttctca tatcattgtt ctgtgcatat caattttgtg tgggaaatgg gtacataact tgatttgact gtggagatta ataagaatat catttcgttt ggcttgcata tgctctatgg tgtatcgttg taaattattc atgcgttatc tatttgctta tcatatgtct tgtctactag gtccatatga accaaactaa ctaatttgca gGCTGGTCCT GATGAGGAAA ATTACATTGG ACGGATTACT GAATTTTTTG AAGGAGTCGA CCGTGGATCA TATTTCTCTT GTCAGTGGTT TTTCCGTACA GCAGATACGg tatgtctgaa ctctgaagta cctttttgtt gctttttaat ggaaatgtaa cacttataag agacatgtat ttgcagGTCA TCTCATCAAA GTTGTTAAAG GTGCATGATC ATAGACATAA CCATAAGCGT GTTTTTCTTT CAAAGGAGAA GAATGACAAC TTGATTGAGT GCATAGTCTC AAAAGTAAAG ATTGCCCATG TTGATCCAAA Tgtaagtgat atattcatta ggcatatatc ctatttaatg cttattatgt tgtcatgtta cagatgattt tttgttgttg ctaatattta aacaaattca gATGACGCCT CAAGCAAGAG CTCATGCTAT ATCTGATTGT GACCTGTACT ATGACATGTC TTACTCTGTT GCATATTCCA CGTTTGCAAA TCTTCCAGCA Ggtaattgtt tacatgattc ttttcccatt gcaattatca taggtgtgta tgtgcatcat tcactttgtt gttaacttac ataagagacc ttttatgata aactgtatga gaaaaatatt ttatattata ttactatttt gaatatttga cagatgcaaa aatacacttg ttgcttcaat attgtcaatc tcaatgttta ttgtcttatc ttctgaggga gctattttct tgtagATAAT GATGGTGCAT TGGGGAGTGA GGCAACATCA AATATTTCCT GCGATGATGC TGACAATTCT TCTAAGGGAA AATTGTCGGC TGATATTGTG GCACCATATA GTGAACAAAC AGAGACAGCT TCTCTGCTTG ATCTTTACTC AGGATGTGGC GCTATGTCAA CTGGGCTTTG TTTGGGTTTT GCATTTTCTG GCATAAATTT AGAGACTgta cgttttgtac ttggtgtgac tcctaactgc ctactaagct cttttgtcta ttgacaatgt taatacttgc tttattgtgc agAGGTGGGC TGTTGACATA AACAAATATG CTTGTGCTTG TCTCAAACAT AATCACCCAT ACTCGCAGgt agtacattcc tgtttccact tgtgtactgc cactagatag tatcaccttg cacatccacc acatagacaa attcatgtgt ttgcttttgc ctctactttg tagGTGCGGA ACGAGAAAAC TGAGGATTTT CTTGCCCTTA TTCAGCAGTG GGATGCACTT TGTAGAAAAT ATGTTGTCCA CAAAAACGAT ACACTAGAAC CTAGTATAGA TATGCCCTTA AATGATGCTG ACGATGTAAA TGAGCCTCTT CCAGAAGATA TATTCGATGT AGAGGAGCTC CTTGAGATAT GCTATGGTGA TCCAAGTAAC ACAGGAAAAA ATGGCTTGTG GTTTAAGgta atagacttaa tgtttactag ttaactagca ttcctttaat ttcatattta tttgtattaa tctagtgtgg tactatatta ttgaaaaagt accctgtgaa ttatatttta tatagGTGCG GTGGAAAGGG TATGATCCAA GTTATGATAC ATGGGAGCCA ATTGATGGGC TCAGgttggt atctctttca ttatgcccct ttcacatttt ttgttttatt gttagtgcct aatcgttaca aatttcagTG ATTGCCCTGA GCGTATTAAA GAATTTGTAG AGAAAGGACA CAAGGAAAAT ATTTTGCCCT TGCCCgtaag tatctttctc atcttctttt tttccttttc agttttgttg tcatgccatc ttatcatgtc ctttaaattc gtaagGGTGC TGTGGATGTC ATATGTGGTG GGCCTCCATG TCAAGGCATC AGTGGGTTCA ACCGATTCAG AAAGCATAAT GATCCACTTG AGGATGAAAA GAACAAACAG TTGGTTGTTT TTATGGATAT AGTGAAGTAT CTGAGGCCCA AATATGTCCT CATGGAAAAT GTTGTGGACA TATTGAAATT TGCAGATGGA TTCCTTGGAC GCTATGCAAT GAGTTGCCTT GTGGCTATGA ATTATCAAGC TAGGCTTGGG ATGATGGCGG CAGGATATTA TGGGCTACCG CAGTTCAGAA TGCGGGCATT TCTCTGGGGA GCCCTTCCAT CAATGgtttc tctctatgct ttcttaatct tattcctttg tgacactttt gcatattaag atgttacatt caccaatagG TATTACCAAA ATTCCCACTT CCTACCCATG ATGCTGTTGT GCGTGGAATA GTACCAACTA CATTTTCGgt aagagaattg agtaaataat tgccaagatt tcattattgt attatgtatt gtcttaatat ttggctgctc catttgcagC AAAGTGTTGT TGCATACAAT GAGGTAGACA CCCGTTGCCT ACGAAAGGCT CTTCTCCTTG CAGATGCCAT ATCTGATTTA CCCAAGgttt gtgttatttt catatatcca tggatcttta tcttttgaat gctgattgga caattgtgtt gttctttttt tgtatgtgct atattacaaa tttacagGTT GGAAATGATC AACCTAAAGA TGTAATAGAG TATAGTGTTG CCCCCAAAAC TGAATTTCAA CGGTATATCC GGAACAACCG TAAAGgtagt ccatgatttg ttactaattg aattaacaaa tatcgataaa tactgttcat gaaatctact ccctccgtcc cataaaaaaa cacacctaat atgggatgtg aaacagtctg ttcagattcg tagtattaag atgatccata tcccttacta ggtttatttt tttatgggat ggagggctat gttcgtttgt tatgctcttt ccctctgcat ttgtggaatt ctaactattt aaattttcat tagtgtgtgg gtttgacaat tgccttgccc gttggtttat gcaattctaa gtgttgctac ttgtagtttc ttgattgaat ttctaggcca agttactttg ttttgttatt cattttcagA CATTCAGGAT TACTCTTTTC GTGGAGATGA TCCTTCTGAA GAAGGTAAAT TGTTTGATCA TCAACCTCTA AAGCTAAACA AAGATGATTA TGAGCGTGTG CAGCGGATAC CTGTAAAAAA Ggttagcaag gcttaagatt gtcatgccag ttactttcaa taccttggtt gcttaccttt ttttctgttt cagGGAGCGA ACTTTCGTGA TCTAAAGGGC GTCATAGTTG GCCCAGATAA TACTGTGCGG CTGGATCCAA ACATTTCCCG TGAACGACTG TCATCTGGGA AGCCTTTGgt acttttatat tttgctatat ttcaacaact gcaatgtcaa tgtttcctct tttgcatgcc attaattact gcttctctgg atagGTGCCT GACTATGCCA TATCTTTCGT CAAGGGGAAG TCAACTAAgt aagtacgttg agcataatgg ttcattttac acaatcttga ttgataattc taattaatct ggcaatgcag ACCGTTTGGA CGCCTGTGGT GGGATGAAAC TGTTCCCACT GTAGTTACCA GAGCTGAGCC TCACAACCAG gtatcatttt ttttttggcg tttttcccat cttaatgcca cttcggttgt aattgtgcat aaacggactc ccccatattg cagATTATTT TGCATCCTAG CCAAGACCGA GTTCTGACTA TTCGCGAGAA TGCAAGGTTG CAAGGTTTTC CTGACTATTA CAGATTGATC GGCCCACTAA AGGAGAAgta agtgcttata ggatgtttgt atcgattgta gtggattcag gaatcagtaa tatggacttt agtgtccata ttttggattg aattactcac agatataata gtatatgaca gatgagtgtt gtgtagttcc attcttatgc tatgtattct tgttcaatgt agATATATCC AGGTTGGCAA TGCGGTTGCA ATTCCAGTTG CTCGAGCTTT GGGGTATGCT CTTGGGCTGG CCTACCGGGG TGAATCTGAT GGAGATCGAG CAGTACTCAA ATTGCCAGAG AGTTTTATTT ATGCTGATCA AGAGACGGTT GTTAAATCTT CGGCAGGAAC TCCTGGAAGT GAAATAGCTG ATTCGGAACA GTTGTTTGAA TAGTATGTTA TCTGAGTCAC TTGTATAGTT GGGTGATGTG CTATAATTGT TTCTGTATGA GTTTCGAACA CGGACAGTGC ATGCATTGTC CAATGCTCCA AACATTCACT GGTTAACCCT GGAACTGAGT AATTTGCATA CGTTTCTTCA TTGGATGTCC ATTTCTTTCT GGTTTAGATA TGTGAGTGAA ATACTTTATT TGCTTCGATT CTAATTGAGC TGCTGCTACA TTGTATTATC GGGCTCTTTA TTTAATGGGA TACTGGCTAC TTTTGAGCAA Aatctatcct tatgctcttg tttttacttg tatgaaattt ccctgtcctg tctgacgtta cacaaagatg catggaacga tagtgttcag tacaccagtt tcgatgctgt tttcttatat gggcataagt tatttgttat ttgacaactg ctgactgtta atgaccgaag attcagtcac tgtttttttt tactgataca aaattcattt aatttctatt actggctctt tattaaaaga aagaaaagaa atctacatgg cacaaagcat ttgcatggta atatacataa actccttttt tttttggagt ttttcatgga cgggccctga ttggctgtta gtactgctgg acagtctcag tacttcagcg aaggcagatg tatttacttt ggagagcctg gcatctgcga aatgacgtga tccatggtaa aggaaatgca tcaatagctg actcggctag cttcctggta agctatgaaa atcaattgta gccgatccga caacgggaag atgatcacaa agggaagggc cctatgtata tggaacataa taaaaaagtt ccaactacaa gtatgaacag acaggctgac agatggtgtg cgccgccgga atatttcgct aaactgaatg ttgacgctgg ttacagagaa gagtctgggg atgcaagcgt cggatttata ttcagagact gaaggggttg gtgcttcttg ctggccacaa aaccttgcat caatgcggtt cttcggccca ggcggaggcg ctagcatgtc tagaaggact gtgatcggcg gttgaattga tccacatgcc aattgtgatg gagatggaca atgctga |
Transcript Splice Model
178-1267 |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 |
>DMT701 | Oryza sativa ssp. japonica | transcript sequence | CMT1 class (CpNpG)
GACGTCACGC ATTCCCGCGA ATCCGGCCTG CTCGAGACCT CCTCCCGTCG CGACGCCGCA AGCCATCAAA GCGCCTCCTG CTTCCGCTCC TATCCAAGGC GAACCACACT CTGCGATCGA GAGCTCGCTG AGCCGTAAAA CCCTAGCTAA TCCTTCTCTC TCCCCCCCTC TCGCTGTCGT CTCCGTCTCC GTCTCCGATC TCCGCGGCCT CGGTTGCGGG CTGCGGCTGC GCCGGTGCGG CTCCATGGTC CCGGAGCCGG CTCCCGCGGC GGCGACGGAG CCGAGGCGCT CCACGCGCAG GCGCCTAATG ACGGCCGCCG CGATGGAGGC CGAGGCGGAG GCGGTGGCCG ACCTCGACGA GATCGACCGC GAGATGTCGC GCGCCGAGTC GCGCAAGCGC CAGCGCAGGA CGGCGAAGGA GAAGCCTGGT GCCCGTAAGG GAGCGACCGA ATGGAAGCCG GAGGACGTGG AGAAGGCGGC GGCGGCGGAG GGGGTGGCCG AGCTCGACGA GATCGACCGC GAGATGCCGC GCCCCGAGTT GCGCAAGCGC CAGCGCAGGA CGGCGAAGGA GAAGCCTAGT GCCCATGAGG GAGCGACCGA ATGGAAGCCG GAGGACGTGG AGAAGGCGGC GGCGCAGGAG CCCGAGGGGA CCGAGCTCGA CAGTGGGTTG TCGCCCGCAG AGTCACGCGG CAAGCGGCAG CGCGGGGTGG AGAAGGTCAA GCGTCGTACC CGTAAGAAGA CGGCCAAGGA GAAGACGAAG GAGACGACCG AGAAGTCGGC GGCTCAGGCG CCCGAGAAGA TGAAGGTGAA CGATGCGGGT GGCGCGCTGG CCGAAGACGT GTGCGCGGAT GAGCCGGACG CCGAACAGAT GGCCATGGAG GAGGAGGAGG AGGCAGCCGA CGTGCTGGAA GCAGAGGAGA GGATGGGTAA GTGTGTCGGA GAAGGATCAG CCGAGAAGGC TGCGACGAGG AAGAGGGTGG CGCGGCCAAG CACTGCGAGA AGGGTGGAGG ACTCAGATGA CCACTTTGTG GGCGATCCAG TACCGGATGA TGAAGCGCGA CAACGATGGC CCGTGAGGTA CAGTAGAAAG GGGTCTGATT CGCTTCTTAA GCAGGAGCCT GACGAAGATG AAGAAATGAA GGCTCGATGT CACTACCTGG CTGCTAATGT GGATGATGAA ATCTATCATC TTGATGATGA TGTCTATGTC AAGGCTGGTC CTGATGAGGA AAATTACATT GGACGGATTA CTGAATTTTT TGAAGGAGTC GACCGTGGAT CATATTTCTC TTGTCAGTGG TTTTTCCGTA CAGCAGATAC GGTCATCTCA TCAAAGTTGT TAAAGGTGCA TGATCATAGA CATAACCATA AGCGTGTTTT TCTTTCAAAG GAGAAGAATG ACAACTTGAT TGAGTGCATA GTCTCAAAAG TAAAGATTGC CCATGTTGAT CCAAATATGA CGCCTCAAGC AAGAGCTCAT GCTATATCTG ATTGTGACCT GTACTATGAC ATGTCTTACT CTGTTGCATA TTCCACGTTT GCAAATCTTC CAGCAGATAA TGATGGTGCA TTGGGGAGTG AGGCAACATC AAATATTTCC TGCGATGATG CTGACAATTC TTCTAAGGGA AAATTGTCGG CTGATATTGT GGCACCATAT AGTGAACAAA CAGAGACAGC TTCTCTGCTT GATCTTTACT CAGGATGTGG CGCTATGTCA ACTGGGCTTT GTTTGGGTTT TGCATTTTCT GGCATAAATT TAGAGACTAG GTGGGCTGTT GACATAAACA AATATGCTTG TGCTTGTCTC AAACATAATC ACCCATACTC GCAGGTGCGG AACGAGAAAA CTGAGGATTT TCTTGCCCTT ATTCAGCAGT GGGATGCACT TTGTAGAAAA TATGTTGTCC ACAAAAACGA TACACTAGAA CCTAGTATAG ATATGCCCTT AAATGATGCT GACGATGTAA ATGAGCCTCT TCCAGAAGAT ATATTCGATG TAGAGGAGCT CCTTGAGATA TGCTATGGTG ATCCAAGTAA CACAGGAAAA AATGGCTTGT GGTTTAAGGT GCGGTGGAAA GGGTATGATC CAAGTTATGA TACATGGGAG CCAATTGATG GGCTCAGTGA TTGCCCTGAG CGTATTAAAG AATTTGTAGA GAAAGGACAC AAGGAAAATA TTTTGCCCTT GCCCGGTGCT GTGGATGTCA TATGTGGTGG GCCTCCATGT CAAGGCATCA GTGGGTTCAA CCGATTCAGA AAGCATAATG ATCCACTTGA GGATGAAAAG AACAAACAGT TGGTTGTTTT TATGGATATA GTGAAGTATC TGAGGCCCAA ATATGTCCTC ATGGAAAATG TTGTGGACAT ATTGAAATTT GCAGATGGAT TCCTTGGACG CTATGCAATG AGTTGCCTTG TGGCTATGAA TTATCAAGCT AGGCTTGGGA TGATGGCGGC AGGATATTAT GGGCTACCGC AGTTCAGAAT GCGGGCATTT CTCTGGGGAG CCCTTCCATC AATGGTATTA CCAAAATTCC CACTTCCTAC CCATGATGCT GTTGTGCGTG GAATAGTACC AACTACATTT TCGCAAAGTG TTGTTGCATA CAATGAGGTA GACACCCGTT GCCTACGAAA GGCTCTTCTC CTTGCAGATG CCATATCTGA TTTACCCAAG GTTGGAAATG ATCAACCTAA AGATGTAATA GAGTATAGTG TTGCCCCCAA AACTGAATTT CAACGGTATA TCCGGAACAA CCGTAAAGAC ATTCAGGATT ACTCTTTTCG TGGAGATGAT CCTTCTGAAG AAGGTAAATT GTTTGATCAT CAACCTCTAA AGCTAAACAA AGATGATTAT GAGCGTGTGC AGCGGATACC TGTAAAAAAG GGAGCGAACT TTCGTGATCT AAAGGGCGTC ATAGTTGGCC CAGATAATAC TGTGCGGCTG GATCCAAACA TTTCCCGTGA ACGACTGTCA TCTGGGAAGC CTTTGGTGCC TGACTATGCC ATATCTTTCG TCAAGGGGAA GTCAACTAAA CCGTTTGGAC GCCTGTGGTG GGATGAAACT GTTCCCACTG TAGTTACCAG AGCTGAGCCT CACAACCAGA TTATTTTGCA TCCTAGCCAA GACCGAGTTC TGACTATTCG CGAGAATGCA AGGTTGCAAG GTTTTCCTGA CTATTACAGA TTGATCGGCC CACTAAAGGA GAAATATATC CAGGTTGGCA ATGCGGTTGC AATTCCAGTT GCTCGAGCTT TGGGGTATGC TCTTGGGCTG GCCTACCGGG GTGAATCTGA TGGAGATCGA GCAGTACTCA AATTGCCAGA GAGTTTTATT TATGCTGATC AAGAGACGGT TGTTAAATCT TCGGCAGGAA CTCCTGGAAG TGAAATAGCT GATTCGGAAC AGTTGTTTGA ATAGTATGTT ATCTGAGTCA CTTGTATAGT TGGGTGATGT GCTATAATTG TTTCTGTATG AGTTTCGAAC ACGGACAGTG CATGCATTGT CCAATGCTCC AAACATTCAC TGGTTAACCC TGGAACTGAG TAATTTGCAT ACGTTTCTTC ATTGGATGTC CATTTCTTTC TGGTTTAGAT ATGTGAGTGA AATACTTTAT TTGCTTCGAT TCTAATTGAG CTGCTGCTAC ATTGTATTAT CGGGCTCTTT ATTTAATGGG ATACTGGCTA CTTTTGAGCA AA |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 |
>DMT701 | Oryza sativa ssp. japonica | orf sequence | CMT1 class (CpNpG)
ATGGAGGCCG AGGCGGAGGC GGTGGCCGAC CTCGACGAGA TCGACCGCGA GATGTCGCGC GCCGAGTCGC GCAAGCGCCA GCGCAGGACG GCGAAGGAGA AGCCTGGTGC CCGTAAGGGA GCGACCGAAT GGAAGCCGGA GGACGTGGAG AAGGCGGCGG CGGCGGAGGG GGTGGCCGAG CTCGACGAGA TCGACCGCGA GATGCCGCGC CCCGAGTTGC GCAAGCGCCA GCGCAGGACG GCGAAGGAGA AGCCTAGTGC CCATGAGGGA GCGACCGAAT GGAAGCCGGA GGACGTGGAG AAGGCGGCGG CGCAGGAGCC CGAGGGGACC GAGCTCGACA GTGGGTTGTC GCCCGCAGAG TCACGCGGCA AGCGGCAGCG CGGGGTGGAG AAGGTCAAGC GTCGTACCCG TAAGAAGACG GCCAAGGAGA AGACGAAGGA GACGACCGAG AAGTCGGCGG CTCAGGCGCC CGAGAAGATG AAGGTGAACG ATGCGGGTGG CGCGCTGGCC GAAGACGTGT GCGCGGATGA GCCGGACGCC GAACAGATGG CCATGGAGGA GGAGGAGGAG GCAGCCGACG TGCTGGAAGC AGAGGAGAGG ATGGGTAAGT GTGTCGGAGA AGGATCAGCC GAGAAGGCTG CGACGAGGAA GAGGGTGGCG CGGCCAAGCA CTGCGAGAAG GGTGGAGGAC TCAGATGACC ACTTTGTGGG CGATCCAGTA CCGGATGATG AAGCGCGACA ACGATGGCCC GTGAGGTACA GTAGAAAGGG GTCTGATTCG CTTCTTAAGC AGGAGCCTGA CGAAGATGAA GAAATGAAGG CTCGATGTCA CTACCTGGCT GCTAATGTGG ATGATGAAAT CTATCATCTT GATGATGATG TCTATGTCAA GGCTGGTCCT GATGAGGAAA ATTACATTGG ACGGATTACT GAATTTTTTG AAGGAGTCGA CCGTGGATCA TATTTCTCTT GTCAGTGGTT TTTCCGTACA GCAGATACGG TCATCTCATC AAAGTTGTTA AAGGTGCATG ATCATAGACA TAACCATAAG CGTGTTTTTC TTTCAAAGGA GAAGAATGAC AACTTGATTG AGTGCATAGT CTCAAAAGTA AAGATTGCCC ATGTTGATCC AAATATGACG CCTCAAGCAA GAGCTCATGC TATATCTGAT TGTGACCTGT ACTATGACAT GTCTTACTCT GTTGCATATT CCACGTTTGC AAATCTTCCA GCAGATAATG ATGGTGCATT GGGGAGTGAG GCAACATCAA ATATTTCCTG CGATGATGCT GACAATTCTT CTAAGGGAAA ATTGTCGGCT GATATTGTGG CACCATATAG TGAACAAACA GAGACAGCTT CTCTGCTTGA TCTTTACTCA GGATGTGGCG CTATGTCAAC TGGGCTTTGT TTGGGTTTTG CATTTTCTGG CATAAATTTA GAGACTAGGT GGGCTGTTGA CATAAACAAA TATGCTTGTG CTTGTCTCAA ACATAATCAC CCATACTCGC AGGTGCGGAA CGAGAAAACT GAGGATTTTC TTGCCCTTAT TCAGCAGTGG GATGCACTTT GTAGAAAATA TGTTGTCCAC AAAAACGATA CACTAGAACC TAGTATAGAT ATGCCCTTAA ATGATGCTGA CGATGTAAAT GAGCCTCTTC CAGAAGATAT ATTCGATGTA GAGGAGCTCC TTGAGATATG CTATGGTGAT CCAAGTAACA CAGGAAAAAA TGGCTTGTGG TTTAAGGTGC GGTGGAAAGG GTATGATCCA AGTTATGATA CATGGGAGCC AATTGATGGG CTCAGTGATT GCCCTGAGCG TATTAAAGAA TTTGTAGAGA AAGGACACAA GGAAAATATT TTGCCCTTGC CCGGTGCTGT GGATGTCATA TGTGGTGGGC CTCCATGTCA AGGCATCAGT GGGTTCAACC GATTCAGAAA GCATAATGAT CCACTTGAGG ATGAAAAGAA CAAACAGTTG GTTGTTTTTA TGGATATAGT GAAGTATCTG AGGCCCAAAT ATGTCCTCAT GGAAAATGTT GTGGACATAT TGAAATTTGC AGATGGATTC CTTGGACGCT ATGCAATGAG TTGCCTTGTG GCTATGAATT ATCAAGCTAG GCTTGGGATG ATGGCGGCAG GATATTATGG GCTACCGCAG TTCAGAATGC GGGCATTTCT CTGGGGAGCC CTTCCATCAA TGGTATTACC AAAATTCCCA CTTCCTACCC ATGATGCTGT TGTGCGTGGA ATAGTACCAA CTACATTTTC GCAAAGTGTT GTTGCATACA ATGAGGTAGA CACCCGTTGC CTACGAAAGG CTCTTCTCCT TGCAGATGCC ATATCTGATT TACCCAAGGT TGGAAATGAT CAACCTAAAG ATGTAATAGA GTATAGTGTT GCCCCCAAAA CTGAATTTCA ACGGTATATC CGGAACAACC GTAAAGACAT TCAGGATTAC TCTTTTCGTG GAGATGATCC TTCTGAAGAA GGTAAATTGT TTGATCATCA ACCTCTAAAG CTAAACAAAG ATGATTATGA GCGTGTGCAG CGGATACCTG TAAAAAAGGG AGCGAACTTT CGTGATCTAA AGGGCGTCAT AGTTGGCCCA GATAATACTG TGCGGCTGGA TCCAAACATT TCCCGTGAAC GACTGTCATC TGGGAAGCCT TTGGTGCCTG ACTATGCCAT ATCTTTCGTC AAGGGGAAGT CAACTAAACC GTTTGGACGC CTGTGGTGGG ATGAAACTGT TCCCACTGTA GTTACCAGAG CTGAGCCTCA CAACCAGATT ATTTTGCATC CTAGCCAAGA CCGAGTTCTG ACTATTCGCG AGAATGCAAG GTTGCAAGGT TTTCCTGACT ATTACAGATT GATCGGCCCA CTAAAGGAGA AATATATCCA GGTTGGCAAT GCGGTTGCAA TTCCAGTTGC TCGAGCTTTG GGGTATGCTC TTGGGCTGGC CTACCGGGGT GAATCTGATG GAGATCGAGC AGTACTCAAA TTGCCAGAGA GTTTTATTTA TGCTGATCAA GAGACGGTTG TTAAATCTTC GGCAGGAACT CCTGGAAGTG AAATAGCTGA TTCGGAACAG TTGTTTGAAT AG |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 |
>DMT701 | Oryza sativa ssp. japonica | protein sequence | CMT1 class (CpNpG)
MEAEAEAVAD LDEIDREMSR AESRKRQRRT AKEKPGARKG ATEWKPEDVE KAAAAEGVAE LDEIDREMPR PELRKRQRRT AKEKPSAHEG ATEWKPEDVE KAAAQEPEGT ELDSGLSPAE SRGKRQRGVE KVKRRTRKKT AKEKTKETTE KSAAQAPEKM KVNDAGGALA EDVCADEPDA EQMAMEEEEE AADVLEAEER MGKCVGEGSA EKAATRKRVA RPSTARRVED SDDHFVGDPV PDDEARQRWP VRYSRKGSDS LLKQEPDEDE EMKARCHYLA ANVDDEIYHL DDDVYVKAGP DEENYIGRIT EFFEGVDRGS YFSCQWFFRT ADTVISSKLL KVHDHRHNHK RVFLSKEKND NLIECIVSKV KIAHVDPNMT PQARAHAISD CDLYYDMSYS VAYSTFANLP ADNDGALGSE ATSNISCDDA DNSSKGKLSA DIVAPYSEQT ETASLLDLYS GCGAMSTGLC LGFAFSGINL ETRWAVDINK YACACLKHNH PYSQVRNEKT EDFLALIQQW DALCRKYVVH KNDTLEPSID MPLNDADDVN EPLPEDIFDV EELLEICYGD PSNTGKNGLW FKVRWKGYDP SYDTWEPIDG LSDCPERIKE FVEKGHKENI LPLPGAVDVI CGGPPCQGIS GFNRFRKHND PLEDEKNKQL VVFMDIVKYL RPKYVLMENV VDILKFADGF LGRYAMSCLV AMNYQARLGM MAAGYYGLPQ FRMRAFLWGA LPSMVLPKFP LPTHDAVVRG IVPTTFSQSV VAYNEVDTRC LRKALLLADA ISDLPKVGND QPKDVIEYSV APKTEFQRYI RNNRKDIQDY SFRGDDPSEE GKLFDHQPLK LNKDDYERVQ RIPVKKGANF RDLKGVIVGP DNTVRLDPNI SRERLSSGKP LVPDYAISFV KGKSTKPFGR LWWDETVPTV VTRAEPHNQI ILHPSQDRVL TIRENARLQG FPDYYRLIGP LKEKYIQVGN AVAIPVARAL GYALGLAYRG ESDGDRAVLK LPESFIYADQ ETVVKSSAGT PGSEIADSEQ LFE |
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Acknowledgements: ChromDB was funded by a grant from the National Science Foundation Plant Genome Research Project(#DBI-0421679; PI Napoli). ChromDB is funded currently by a Mexican grant to R. Jorgensen via the Consejo Nacional de Ciencia y Tecnología (Conacyt). ChromDB server is hosted by the Biotechnology Computing Facility at the University of Arizona.
Design by Western Sky Communications