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NRPDA2204 (Oryza sativa (indica cultivar-group)) |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501 4561 4621 4681 4741 4801 4861 4921 4981 5041 5101 5161 5221 5281 5341 5401 5461 5521 5581 5641 5701 5761 5821 5881 5941 6001 6061 6121 6181 6241 6301 6361 6421 6481 6541 6601 6661 6721 6781 6841 6901 6961 7021 7081 7141 7201 7261 7321 7381 7441 7501 7561 7621 7681 7741 7801 7861 7921 7981 |
>NRPDA2204 | Oryza sativa (indica cultivar-group) | genomic sequence | RNA Polymerase IV Large Subunit
tgatgtaggc ctcaccctta ttcacaaagt agatagaaca tatggagtag gcaagatacc aaagttggat ggagagagag agagtaaaag atgcgtgttg actgttgagt attgagtgag taaaagagag gcctcctgcc ttctgagttc tgagctttct caatacttga cacttacact ttgggtggct actggttggt tacagttaca gaagaggttt gtataacaca gtaaaaacca gtagagaata cagttcccaa aaaacttcat tcctgtgttt gtttggcatc tgaggtcgcc attgatcgac tagcaagctc ttgatcttgt ccatccataa ccatattaaa aaaaagaaac aaaggtatgt tctagggttc ttcggttgat atctagttgt ttgattctcc ttttggttgg acatgacact gatcgtacga accatttggt ttcagtgatt gcatactaac ctctgcctcc ataggtacag tcgtacagaa atggaaggtc atcctgatcc aacatctgct gctactgcca tgatccccga ggcctcgatc agacgcatca acctgagtat caccagcaac gaggaaattg taagctgtca aaccatcatc accttcacct gccaatggta tttggcatat tcttttaccc attgctgtga ctcctgtgta ttcggcagCT GAAGGCGCAG CCGGTGAACG AGCTCGAGAA GCCGATCCCC ATCACGCATC AAAGCCAGCT GCTGAACAAT CCATACTTGG GCCTGCCTCT GCAAGTCGGC GACGCCATCG AAGAATGCGA AGgtatgcta gtcagtcgca atctcttttg tgcgatcctg cattggacaa taactttcag atttccaaac gggtgcaaat gaaagcaagt tttgtgaagt tattcactgt ttattttgca tggcatgatg tctgaaaatc tgtttctgga aaaaaaaaga aaagatattg caaagaacag tttcagagac agtgctcact cttcactctg ttgtgtacct ttgatggaaa taaaattcat tttttgatga ttgattccaa gGTCACTTCG GATTCATTGA GCTGCCCATG CCCATCTTCC ACCCGAGCCA TGTCACCGAG CTGAGCCAGA TACTCAACTT AATATGCCTG AGATGCCTCA AGATCAAGAA CAGAAAGgta caactgcaaa aaccatgctc aagcatatca tcagcatatg cgataagcca tactatattg tcatcgctaa cacatgtttc tgcacttaac aactcaaaca gaagagcact cttaagggaa gcaaattcac ttcatgttca cactgtcagg taatttgcag ctgatcatcc atttatgttt cttagGGGTC AATGTTGCTT TTCCCTCAAC Tgtgaaaagc caagtaatgc aaacaggcat cattagttct tgaatccatc ttattccagg agctcccacc gctgtgcgtt gcagaagtct agaagtctaa tggtgcccgt ggcttggagt tgagAGCACC TATCAAGAAA GAACTGGAAG AGGGATTCTG GAGCTTCCTT GATCAGTTTG GCAGTTGCAC GAGGGGTACC TCTCATTGTC GTCCTTTGCT CCCAGAAGAG gtactcttgc tcatgttgcg aaagccaccc ctgttggaac aaagcaaaga taaatgcata agtttcagaa cttacataga gtagctttgc atatagaaat tgttgcacac atttatctta ctatctgtcc cccttcacat tttattcttc tgtttgtcag GTCCAAAACA TCATAAAGAA GATCCCTGAA GAAACAAGAA GGTGGCTTTC TGTTAGGGGA TATATTCCTC AGGATGGTTT TATACTGAGC TATCTCTGCG TCCCACCAAA CTGCCTGAGG GTTTCCAATG TTTTGGATGG AAATACATTC AGCTGTTCAg taagttcatc ctaatcaaac actatttgat tgaagtttgg aagttctttt ttcctttttc ccttctagat gtcattacca ctgacctagt gattatgtcc cttctttaat cagGGCACAT CGACAAACTT ATTAAGGAAA GCACTACGTA AGATACAACA GATTCGTGGT TCAAGGATTG GTTCCTCAAA CATCCAAGTG GATCAAGTTG CAGATGATCT TCAGGTCGAT GTTGCCAACT ACATCAACCT CGGAGGAACA ACAAAGgtac atgattcatt agtaaataaa gtgtaggtta ccttcttcat cataattgca tcttcataaa tttatcatcg tatgtctctt gaagGGTCAC GGAGATGACA CGTTCACAAG TCAACCAACA GCAATGCAAT GGAAGCAAAA AATGAAGACA TTGTTCATCA GTAAGAGCTC AAGCTTCTCG TCCCGTGGTG TGATTACTGG TGATCCATAC ATTGGTCTCA ATGTTGTTGG GGTGCCTGAG GAAGTAGCAA AGAGAATGTC AGTAGAAGAA AAAGTCACAG ACCACAACAT TGCTCAATTG CAAGACATGA TGAATAAAGG ACTATGTTTG ACATATACAG ATGCCAATTC CATCACGTAC TCATTGGATG CAGGGAAGGA CAATCCGAAC AAGAAACACA CCATACTGAA GGTCGGCGAA ATTGTCAACA GAAGGGTTTT CGACGGGGAT ATTGTCTTCC TCAACAGGCC ACCAAGCACT GATAAGCACT CAGTTGAGGC CTTCTATGTC CAAGTCCACA ATGATCACAC CATAAAGATC AACCCACTCA TTTGTGACCC ACTTGGAGCA GATTTTGATG ATGACTGTGT CCAAATCTTC TACCCAAGGT CGCTTTCAGC AAGAGCTGAA GCTAAAGAGC TATACACTGT GGATAAGCAG CTGGTGAGCT CCCATAATGG GAAACTGAAC TTTCAGTTCA AGAATGATTT CTCACTAGCT CTGAAGATCA TGTGTGGCAG GGAGTATTCT GAGAGGGAAG CAAACCAAAT TACAAATGCA ATGTTCTCAT CAGGGATGTA CCCCCAGAAG CCACTGATTG GTGGACCTTA CTGGACCTTT CCTCAGATTC TAGAGACCAC TAAATCTAAT GCAATAACAC TGGCAGACCA TCTTGACAGA GAATCTGTTG GAGCCTTAGC TACTGGTACC ACCATCTCAT CGATCCTTTC TACAAAGGGT CCAAGGGAGG CCACAGAATT TCTGAATCTT CTGCAGCCCT TACTAATGGA GTCACTGCTT ATTGATGGAT TCAGCATAAA TTTGGGAGAT TTCACTGTCC CAAGTCCAAT TCTGGAAGCT ATTCAAAATA ATCCACTTGA GCTAAATAAG TACAGGGAAC CAATTATGGA TTTCATAACC CATTCTTCTG CCATAGGACT GTTGGTTGAT CCCAAAAGTG ATTCCAACAT GAACAAAGTA GTGGAGCAGC TTGGTTTCCT GGGGCCTCAA CTACAACACA ACGGAAGACT ATACAGTAGC AGGTTAGTGG AGGATTGCCT GTCTAAGTCT CTGCACAGAT GTTGTGGGAG TACCAATTGT TGCAACCCTC TAGAGGAACA TGGTACTGTA AGGAGCTCAA TTTACCATGG ACTAAACCCA TATGAGGCTC TACTTCATTC TATATGTGAA AGGGAGAAGA TAATGCGTGC ATCTAAAGGG CTAGTGGAGC CTGGCAGTCT TTTCAAGAAC ATGATGTCAA GACTCCGAGA TGTCACAGCA TGCTATGATG GATCCATAAG AACTTCGTCT GGTAACTTAG TTCTTCAGTT TGGCTCAAGG GATGCATCAA ATTGTGTGAC ACCAGGTGAC CCCGTTGGTA TCTTGGCAGC CACTGCAGTT GCAAATGCTG CTTACAAGGC AGTGTTGGCT CCTAATCAGA ATAATATAAT TTCTTGGGAC TCGATGAAGg tgagaagctg accagatcaa ttcactccaa gcctcagttc aattcatatg tagactgtaa tttactaatt ttgactacta aattttgttt tactactaaa ttcatatgtt ttttttacca ctaaatgtta ctgttatagG AAGTACTGCT TACCAGGGCA AGCACTAAAG CTGATGCCAA TCACCGAAAG GTCATTTTGT ATCTGAACCA GTGCTCTTGT GAAAATGAAT GCATGGAGAG AGCACTCACA ATTCGAGCCT GCTTAAGGAG GATCAAATTA GAGGATTGTA CCACAGAGAT ATCCATCAAg tatgtactat caggctttcc aattatttat gcttctgcaa tgtaaagata caagtcctat tgattctact ttacctgaac tataaattaa actaaatcta caaaacttat ttcatgtgat gcaagcaatt aaacatcaac tattgatttg gcatcctatt gaactttttg gggaaaaaga gcatttcgtt gaacttgccc agttcagtcc agcattagtt tcttagattt cccttttagt agttctacat tgtccaaggc tcagaattgt tgggataata tttcagGTAT CAACAGCAAG CAACTCAAGC AGCTCATCAT CTTGTTGGCC ATATTCACCT TGACAAGgtc tatcattcag taactcaaat tatatccatg tcatttcata ataatcacta agattataag tttctcttgc tcttacagAA GCAATTGAAT CAGATTGAAA CAATTATGGA CAGTGTTCTT CACAAATGCC AGGAGACTTT TAGGAATAAC ATAAAGAAGA AGGGGTCGAT GCGTGAAATA TTGAAGACAg tcactttcat ttcaagatgc ttcaaacttc tattatttta gcaataaaga cagtatgaat agagatttac tgctcttctg aacttcaggt ccagtagtct actaatttaa gtcatatgtt cagtgctaga ccactaagtt ctttatggca cagttcagAC TCTAGTAAAT ATATTATCTT CCATTAGGTA TTTATGCATT TGGGACTACC ATCCATATTT TGAgtaaaag aatattttta aggaagtatg actacatttt tgttgtaaac taaatcatgt gtttcttctt tgcagCACAA GTTTGTGCGA CCAACATACA GATGATGATC AAGAATTTCG GGTTTCCTGC TTGCAGTTTT TCCTCCCTGC AAGCATCACT AAAAATATAT CTGAATCTAC TGAACGAGTT ATCGATTTCA TGACTAATGC CATTTTCCCT ATAATTTTAG ACACTGTTAT AAAAGgtaaa aaaaatgcaa gaggaacatc cagacagtta tggtgaaaat gtcctatgca attatgctta cttacaatca attctgcacc ttctcttcac agGTGATCCT CGAGTTGAGG AAGCCAACCT AGTAAGGATT GAACCAGAAT CAACATTTTG GGTCCAGAGC TCTGGTGCAG AACAGAAAGG CGAGGTGGCA CTGGAAATCA CCGTGGAAAA GGCTGCGGCT GCTGAGAGTG GCAATGCCTG GGGAGTAGCA ATGGATGCAT GTATCCCTGT GATGGATCTG ATTGACACCA CCAGGTCTAT GCCGTACGAT ATACAGCAAG TCCGACAGGT GTTTGGCATT TCCTCCGCAT TCGAAAAAGT CACACAGgtt cagttattcc cctttctcct tttagctgaa attcaggtaa cttctgctga aacattgctc gtgttgtgct cctttcagTA CCTTTCCAAG TCTGTTGGAA TGATTACAAA ATCAGTTCTC CAAGAGCACC TGACAACAGT TGCAAGTAGC ATGACCTGCA CAGGCGATTT GCATGGCTTC AACAACTCTG GCTACAAGGC CACATGTCAA TCTCTGAAGG TTCAGGCACC ATTTATGGAG GCTACACTAT CAgtaagtca tgcactctca tctcttttga aatcctcact taaatgagcc agaaccaagt cttggtcata attcaaatat aacaaaacat gttgcagAGA TCAATACAAT GCTTTGAGAA GGCAGCAGCG AAGGCCTACT CCGATCAGCT GGGCAATGTT GTATCAGCCT GCTCTTGGGG CAATAATACA GAAATTGGAA CTGGTTCAGC TTTTGAAATC CTTTGGAATG ACGAGAACAT Ggtacatttg acaactttac ttgttaacac cactcatatt tacagaggct tttgaagatc actttaactt cttatctctt ttcagTCATC AAGCAAGAGT ATCCTTGGTG GGTATGGTCT GTATGACTTC TTGGAAGCAG TAGAAACAAC AGGAGCAACT AAAGATAAGG CAATTGTTCC TCATAACTAC TGCTTATATG ATGTTGACTG CATTCCAGAG GATAAAGTAT GTTTAGAAGA AAACAATCAG ATCACCTGGA CAGACAAACC AAAAGCTGAA TTCCTGATGG AATCTGAGGG TAGGAGGGCA GGGATGCACA GCACTGGCCA AAAACATCCG AGGAAGCCAA ATTGGCATGA AGGAAACACC AAGAGTTCCC CAAATTCTAC TGCAGTAGAA TTTACTGGTC AGGTGTTCCA GAGAAGGCAA CTGAAGACCA AGAGTAACTG GAACTCAGAT GCAACACAGC AAGATGATAA AAAACCAAGT TGGTATAGTT CAAATAGCGC GGGCACACAG AACTTCACCA TTGCAGGATC ATCCCGACCA GGTGAATGGA ACAGGAAGAA TAATAATCGC GGTCAAGGTG GTGGTAGAGC AGTGTGGAAA TCAGAGGGAC CACACCGTGG AGGCAGTAGC AGTAATAGGA ATCAAGGTGG TGGTAGAGCA GTGTGGAAAT CAGAGGCATC ACACCGAGGC AGTAGCAATA ATAGGAATCG AGGTGGTGGT AGAGCAGTGT GGAAATCAGA GGCATCACGC CGTGGAGGCA GTATGAGGCA GGTAGCGAGT TGTGCTTTTA CACCAGTGGA GCAGCAGATA TTTGAACAAA TCGAACCAAT CACAAAGAAT GTAAAGAGGA TCATCCGTGA ATCGAGgtat ttttctggtc caataaactt gaaaaggcac aagtactagg attcttcatt tttcaaccac tagtacgttg atagctagat gataagatgg aagttaagTG TATGTTCAAA CACCGCCCAG GTGGTTCCTT CTGTTGTATC CCTTACAGTC CATCTCTCTC AATACTTTTG CAGGGACggt attaaacttc ctccagatgg tgagaagttt attgtcacaa atgttctcat gtaccaccca gagaggaaga agaagatagc tggcaacggc aactacataa cagtaagcaa cttgccttct tgaatctttc tgcgtcagat gaaccaaaaa atggaaaacc atgaggactc atttgctgct tataggtcga taggcatcag gtattccatg gaagtaggtg cttatatgtc atgtcctcag atggatccag aaaagatttc tcctacaaga agtgcctgga gaactacatc agagctcagt acccagatgc tgcagattca ttctgcagaa agtacttcaa atgatgaacc atagcacgtt aaatttctgt tgcactcttg tatttggtgc ccacaaactt atctactcta cctcagtatg atcaaacatg ttctgtaact gtgaacttgt atttggtgcc cacaaactta tctactctac ctcagtatga tcaaacatgt tcagtaactg tgaactcatt actgaacatc agaaaaacac taaatgccta gacacttcaa tgtttttatt gcattgtgac tgatactata ttgttgaatt actctaaaga ggcaaccgta ccctttaagt taacagcaac cactaaaata agatgcctag tcgcctagac ctcgcactca aacattagca gttatataga gtttcatgtt gaatcatatc actatgattt atttttcttt ttgagacaaa gcatatcagt atatcactat gaatttgaag ctgatgaaac atctagtagt ggtagaatca taaaacatcc attaaatgga aattttcaaa cta |
Transcript Splice Model
689-812 |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 |
>NRPDA2204 | Oryza sativa (indica cultivar-group) | transcript sequence | RNA Polymerase IV Large Subunit
CTGAAGGCGC AGCCGGTGAA CGAGCTCGAG AAGCCGATCC CCATCACGCA TCAAAGCCAG CTGCTGAACA ATCCATACTT GGGCCTGCCT CTGCAAGTCG GCGACGCCAT CGAAGAATGC GAAGGTCACT TCGGATTCAT TGAGCTGCCC ATGCCCATCT TCCACCCGAG CCATGTCACC GAGCTGAGCC AGATACTCAA CTTAATATGC CTGAGATGCC TCAAGATCAA GAACAGAAAG GGGTCAATGT TGCTTTTCCC TCAACTAGCA CCTATCAAGA AAGAACTGGA AGAGGGATTC TGGAGCTTCC TTGATCAGTT TGGCAGTTGC ACGAGGGGTA CCTCTCATTG TCGTCCTTTG CTCCCAGAAG AGGTCCAAAA CATCATAAAG AAGATCCCTG AAGAAACAAG AAGGTGGCTT TCTGTTAGGG GATATATTCC TCAGGATGGT TTTATACTGA GCTATCTCTG CGTCCCACCA AACTGCCTGA GGGTTTCCAA TGTTTTGGAT GGAAATACAT TCAGCTGTTC AGGCACATCG ACAAACTTAT TAAGGAAAGC ACTACGTAAG ATACAACAGA TTCGTGGTTC AAGGATTGGT TCCTCAAACA TCCAAGTGGA TCAAGTTGCA GATGATCTTC AGGTCGATGT TGCCAACTAC ATCAACCTCG GAGGAACAAC AAAGGGTCAC GGAGATGACA CGTTCACAAG TCAACCAACA GCAATGCAAT GGAAGCAAAA AATGAAGACA TTGTTCATCA GTAAGAGCTC AAGCTTCTCG TCCCGTGGTG TGATTACTGG TGATCCATAC ATTGGTCTCA ATGTTGTTGG GGTGCCTGAG GAAGTAGCAA AGAGAATGTC AGTAGAAGAA AAAGTCACAG ACCACAACAT TGCTCAATTG CAAGACATGA TGAATAAAGG ACTATGTTTG ACATATACAG ATGCCAATTC CATCACGTAC TCATTGGATG CAGGGAAGGA CAATCCGAAC AAGAAACACA CCATACTGAA GGTCGGCGAA ATTGTCAACA GAAGGGTTTT CGACGGGGAT ATTGTCTTCC TCAACAGGCC ACCAAGCACT GATAAGCACT CAGTTGAGGC CTTCTATGTC CAAGTCCACA ATGATCACAC CATAAAGATC AACCCACTCA TTTGTGACCC ACTTGGAGCA GATTTTGATG ATGACTGTGT CCAAATCTTC TACCCAAGGT CGCTTTCAGC AAGAGCTGAA GCTAAAGAGC TATACACTGT GGATAAGCAG CTGGTGAGCT CCCATAATGG GAAACTGAAC TTTCAGTTCA AGAATGATTT CTCACTAGCT CTGAAGATCA TGTGTGGCAG GGAGTATTCT GAGAGGGAAG CAAACCAAAT TACAAATGCA ATGTTCTCAT CAGGGATGTA CCCCCAGAAG CCACTGATTG GTGGACCTTA CTGGACCTTT CCTCAGATTC TAGAGACCAC TAAATCTAAT GCAATAACAC TGGCAGACCA TCTTGACAGA GAATCTGTTG GAGCCTTAGC TACTGGTACC ACCATCTCAT CGATCCTTTC TACAAAGGGT CCAAGGGAGG CCACAGAATT TCTGAATCTT CTGCAGCCCT TACTAATGGA GTCACTGCTT ATTGATGGAT TCAGCATAAA TTTGGGAGAT TTCACTGTCC CAAGTCCAAT TCTGGAAGCT ATTCAAAATA ATCCACTTGA GCTAAATAAG TACAGGGAAC CAATTATGGA TTTCATAACC CATTCTTCTG CCATAGGACT GTTGGTTGAT CCCAAAAGTG ATTCCAACAT GAACAAAGTA GTGGAGCAGC TTGGTTTCCT GGGGCCTCAA CTACAACACA ACGGAAGACT ATACAGTAGC AGGTTAGTGG AGGATTGCCT GTCTAAGTCT CTGCACAGAT GTTGTGGGAG TACCAATTGT TGCAACCCTC TAGAGGAACA TGGTACTGTA AGGAGCTCAA TTTACCATGG ACTAAACCCA TATGAGGCTC TACTTCATTC TATATGTGAA AGGGAGAAGA TAATGCGTGC ATCTAAAGGG CTAGTGGAGC CTGGCAGTCT TTTCAAGAAC ATGATGTCAA GACTCCGAGA TGTCACAGCA TGCTATGATG GATCCATAAG AACTTCGTCT GGTAACTTAG TTCTTCAGTT TGGCTCAAGG GATGCATCAA ATTGTGTGAC ACCAGGTGAC CCCGTTGGTA TCTTGGCAGC CACTGCAGTT GCAAATGCTG CTTACAAGGC AGTGTTGGCT CCTAATCAGA ATAATATAAT TTCTTGGGAC TCGATGAAGG AAGTACTGCT TACCAGGGCA AGCACTAAAG CTGATGCCAA TCACCGAAAG GTCATTTTGT ATCTGAACCA GTGCTCTTGT GAAAATGAAT GCATGGAGAG AGCACTCACA ATTCGAGCCT GCTTAAGGAG GATCAAATTA GAGGATTGTA CCACAGAGAT ATCCATCAAG TATCAACAGC AAGCAACTCA AGCAGCTCAT CATCTTGTTG GCCATATTCA CCTTGACAAG AAGCAATTGA ATCAGATTGA AACAATTATG GACAGTGTTC TTCACAAATG CCAGGAGACT TTTAGGAATA ACATAAAGAA GAAGGGGTCG ATGCGTGAAA TATTGAAGAC AACTCTAGTA AATATATTAT CTTCCATTAG GTATTTATGC ATTTGGGACT ACCATCCATA TTTTGACACA AGTTTGTGCG ACCAACATAC AGATGATGAT CAAGAATTTC GGGTTTCCTG CTTGCAGTTT TTCCTCCCTG CAAGCATCAC TAAAAATATA TCTGAATCTA CTGAACGAGT TATCGATTTC ATGACTAATG CCATTTTCCC TATAATTTTA GACACTGTTA TAAAAGGTGA TCCTCGAGTT GAGGAAGCCA ACCTAGTAAG GATTGAACCA GAATCAACAT TTTGGGTCCA GAGCTCTGGT GCAGAACAGA AAGGCGAGGT GGCACTGGAA ATCACCGTGG AAAAGGCTGC GGCTGCTGAG AGTGGCAATG CCTGGGGAGT AGCAATGGAT GCATGTATCC CTGTGATGGA TCTGATTGAC ACCACCAGGT CTATGCCGTA CGATATACAG CAAGTCCGAC AGGTGTTTGG CATTTCCTCC GCATTCGAAA AAGTCACACA GTACCTTTCC AAGTCTGTTG GAATGATTAC AAAATCAGTT CTCCAAGAGC ACCTGACAAC AGTTGCAAGT AGCATGACCT GCACAGGCGA TTTGCATGGC TTCAACAACT CTGGCTACAA GGCCACATGT CAATCTCTGA AGGTTCAGGC ACCATTTATG GAGGCTACAC TATCAAGATC AATACAATGC TTTGAGAAGG CAGCAGCGAA GGCCTACTCC GATCAGCTGG GCAATGTTGT ATCAGCCTGC TCTTGGGGCA ATAATACAGA AATTGGAACT GGTTCAGCTT TTGAAATCCT TTGGAATGAC GAGAACATGT CATCAAGCAA GAGTATCCTT GGTGGGTATG GTCTGTATGA CTTCTTGGAA GCAGTAGAAA CAACAGGAGC AACTAAAGAT AAGGCAATTG TTCCTCATAA CTACTGCTTA TATGATGTTG ACTGCATTCC AGAGGATAAA GTATGTTTAG AAGAAAACAA TCAGATCACC TGGACAGACA AACCAAAAGC TGAATTCCTG ATGGAATCTG AGGGTAGGAG GGCAGGGATG CACAGCACTG GCCAAAAACA TCCGAGGAAG CCAAATTGGC ATGAAGGAAA CACCAAGAGT TCCCCAAATT CTACTGCAGT AGAATTTACT GGTCAGGTGT TCCAGAGAAG GCAACTGAAG ACCAAGAGTA ACTGGAACTC AGATGCAACA CAGCAAGATG ATAAAAAACC AAGTTGGTAT AGTTCAAATA GCGCGGGCAC ACAGAACTTC ACCATTGCAG GATCATCCCG ACCAGGTGAA TGGAACAGGA AGAATAATAA TCGCGGTCAA GGTGGTGGTA GAGCAGTGTG GAAATCAGAG GGACCACACC GTGGAGGCAG TAGCAGTAAT AGGAATCAAG GTGGTGGTAG AGCAGTGTGG AAATCAGAGG CATCACACCG AGGCAGTAGC AATAATAGGA ATCGAGGTGG TGGTAGAGCA GTGTGGAAAT CAGAGGCATC ACGCCGTGGA GGCAGTATGA GGCAGGTAGC GAGTTGTGCT TTTACACCAG TGGAGCAGCA GATATTTGAA CAAATCGAAC CAATCACAAA GAATGTAAAG AGGATCATCC GTGAATCGAG TGTATGTTCA AACACCGCCC AGGTGGTTCC TTCTGTTGTA TCCCTTACAG TCCATCTCTC TCAATACTTT TGCAGGGAC |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 |
>NRPDA2204 | Oryza sativa (indica cultivar-group) | orf sequence | RNA Polymerase IV Large Subunit
CTGAAGGCGC AGCCGGTGAA CGAGCTCGAG AAGCCGATCC CCATCACGCA TCAAAGCCAG CTGCTGAACA ATCCATACTT GGGCCTGCCT CTGCAAGTCG GCGACGCCAT CGAAGAATGC GAAGGTCACT TCGGATTCAT TGAGCTGCCC ATGCCCATCT TCCACCCGAG CCATGTCACC GAGCTGAGCC AGATACTCAA CTTAATATGC CTGAGATGCC TCAAGATCAA GAACAGAAAG GGGTCAATGT TGCTTTTCCC TCAACTAGCA CCTATCAAGA AAGAACTGGA AGAGGGATTC TGGAGCTTCC TTGATCAGTT TGGCAGTTGC ACGAGGGGTA CCTCTCATTG TCGTCCTTTG CTCCCAGAAG AGGTCCAAAA CATCATAAAG AAGATCCCTG AAGAAACAAG AAGGTGGCTT TCTGTTAGGG GATATATTCC TCAGGATGGT TTTATACTGA GCTATCTCTG CGTCCCACCA AACTGCCTGA GGGTTTCCAA TGTTTTGGAT GGAAATACAT TCAGCTGTTC AGGCACATCG ACAAACTTAT TAAGGAAAGC ACTACGTAAG ATACAACAGA TTCGTGGTTC AAGGATTGGT TCCTCAAACA TCCAAGTGGA TCAAGTTGCA GATGATCTTC AGGTCGATGT TGCCAACTAC ATCAACCTCG GAGGAACAAC AAAGGGTCAC GGAGATGACA CGTTCACAAG TCAACCAACA GCAATGCAAT GGAAGCAAAA AATGAAGACA TTGTTCATCA GTAAGAGCTC AAGCTTCTCG TCCCGTGGTG TGATTACTGG TGATCCATAC ATTGGTCTCA ATGTTGTTGG GGTGCCTGAG GAAGTAGCAA AGAGAATGTC AGTAGAAGAA AAAGTCACAG ACCACAACAT TGCTCAATTG CAAGACATGA TGAATAAAGG ACTATGTTTG ACATATACAG ATGCCAATTC CATCACGTAC TCATTGGATG CAGGGAAGGA CAATCCGAAC AAGAAACACA CCATACTGAA GGTCGGCGAA ATTGTCAACA GAAGGGTTTT CGACGGGGAT ATTGTCTTCC TCAACAGGCC ACCAAGCACT GATAAGCACT CAGTTGAGGC CTTCTATGTC CAAGTCCACA ATGATCACAC CATAAAGATC AACCCACTCA TTTGTGACCC ACTTGGAGCA GATTTTGATG ATGACTGTGT CCAAATCTTC TACCCAAGGT CGCTTTCAGC AAGAGCTGAA GCTAAAGAGC TATACACTGT GGATAAGCAG CTGGTGAGCT CCCATAATGG GAAACTGAAC TTTCAGTTCA AGAATGATTT CTCACTAGCT CTGAAGATCA TGTGTGGCAG GGAGTATTCT GAGAGGGAAG CAAACCAAAT TACAAATGCA ATGTTCTCAT CAGGGATGTA CCCCCAGAAG CCACTGATTG GTGGACCTTA CTGGACCTTT CCTCAGATTC TAGAGACCAC TAAATCTAAT GCAATAACAC TGGCAGACCA TCTTGACAGA GAATCTGTTG GAGCCTTAGC TACTGGTACC ACCATCTCAT CGATCCTTTC TACAAAGGGT CCAAGGGAGG CCACAGAATT TCTGAATCTT CTGCAGCCCT TACTAATGGA GTCACTGCTT ATTGATGGAT TCAGCATAAA TTTGGGAGAT TTCACTGTCC CAAGTCCAAT TCTGGAAGCT ATTCAAAATA ATCCACTTGA GCTAAATAAG TACAGGGAAC CAATTATGGA TTTCATAACC CATTCTTCTG CCATAGGACT GTTGGTTGAT CCCAAAAGTG ATTCCAACAT GAACAAAGTA GTGGAGCAGC TTGGTTTCCT GGGGCCTCAA CTACAACACA ACGGAAGACT ATACAGTAGC AGGTTAGTGG AGGATTGCCT GTCTAAGTCT CTGCACAGAT GTTGTGGGAG TACCAATTGT TGCAACCCTC TAGAGGAACA TGGTACTGTA AGGAGCTCAA TTTACCATGG ACTAAACCCA TATGAGGCTC TACTTCATTC TATATGTGAA AGGGAGAAGA TAATGCGTGC ATCTAAAGGG CTAGTGGAGC CTGGCAGTCT TTTCAAGAAC ATGATGTCAA GACTCCGAGA TGTCACAGCA TGCTATGATG GATCCATAAG AACTTCGTCT GGTAACTTAG TTCTTCAGTT TGGCTCAAGG GATGCATCAA ATTGTGTGAC ACCAGGTGAC CCCGTTGGTA TCTTGGCAGC CACTGCAGTT GCAAATGCTG CTTACAAGGC AGTGTTGGCT CCTAATCAGA ATAATATAAT TTCTTGGGAC TCGATGAAGG AAGTACTGCT TACCAGGGCA AGCACTAAAG CTGATGCCAA TCACCGAAAG GTCATTTTGT ATCTGAACCA GTGCTCTTGT GAAAATGAAT GCATGGAGAG AGCACTCACA ATTCGAGCCT GCTTAAGGAG GATCAAATTA GAGGATTGTA CCACAGAGAT ATCCATCAAG TATCAACAGC AAGCAACTCA AGCAGCTCAT CATCTTGTTG GCCATATTCA CCTTGACAAG AAGCAATTGA ATCAGATTGA AACAATTATG GACAGTGTTC TTCACAAATG CCAGGAGACT TTTAGGAATA ACATAAAGAA GAAGGGGTCG ATGCGTGAAA TATTGAAGAC AACTCTAGTA AATATATTAT CTTCCATTAG GTATTTATGC ATTTGGGACT ACCATCCATA TTTTGACACA AGTTTGTGCG ACCAACATAC AGATGATGAT CAAGAATTTC GGGTTTCCTG CTTGCAGTTT TTCCTCCCTG CAAGCATCAC TAAAAATATA TCTGAATCTA CTGAACGAGT TATCGATTTC ATGACTAATG CCATTTTCCC TATAATTTTA GACACTGTTA TAAAAGGTGA TCCTCGAGTT GAGGAAGCCA ACCTAGTAAG GATTGAACCA GAATCAACAT TTTGGGTCCA GAGCTCTGGT GCAGAACAGA AAGGCGAGGT GGCACTGGAA ATCACCGTGG AAAAGGCTGC GGCTGCTGAG AGTGGCAATG CCTGGGGAGT AGCAATGGAT GCATGTATCC CTGTGATGGA TCTGATTGAC ACCACCAGGT CTATGCCGTA CGATATACAG CAAGTCCGAC AGGTGTTTGG CATTTCCTCC GCATTCGAAA AAGTCACACA GTACCTTTCC AAGTCTGTTG GAATGATTAC AAAATCAGTT CTCCAAGAGC ACCTGACAAC AGTTGCAAGT AGCATGACCT GCACAGGCGA TTTGCATGGC TTCAACAACT CTGGCTACAA GGCCACATGT CAATCTCTGA AGGTTCAGGC ACCATTTATG GAGGCTACAC TATCAAGATC AATACAATGC TTTGAGAAGG CAGCAGCGAA GGCCTACTCC GATCAGCTGG GCAATGTTGT ATCAGCCTGC TCTTGGGGCA ATAATACAGA AATTGGAACT GGTTCAGCTT TTGAAATCCT TTGGAATGAC GAGAACATGT CATCAAGCAA GAGTATCCTT GGTGGGTATG GTCTGTATGA CTTCTTGGAA GCAGTAGAAA CAACAGGAGC AACTAAAGAT AAGGCAATTG TTCCTCATAA CTACTGCTTA TATGATGTTG ACTGCATTCC AGAGGATAAA GTATGTTTAG AAGAAAACAA TCAGATCACC TGGACAGACA AACCAAAAGC TGAATTCCTG ATGGAATCTG AGGGTAGGAG GGCAGGGATG CACAGCACTG GCCAAAAACA TCCGAGGAAG CCAAATTGGC ATGAAGGAAA CACCAAGAGT TCCCCAAATT CTACTGCAGT AGAATTTACT GGTCAGGTGT TCCAGAGAAG GCAACTGAAG ACCAAGAGTA ACTGGAACTC AGATGCAACA CAGCAAGATG ATAAAAAACC AAGTTGGTAT AGTTCAAATA GCGCGGGCAC ACAGAACTTC ACCATTGCAG GATCATCCCG ACCAGGTGAA TGGAACAGGA AGAATAATAA TCGCGGTCAA GGTGGTGGTA GAGCAGTGTG GAAATCAGAG GGACCACACC GTGGAGGCAG TAGCAGTAAT AGGAATCAAG GTGGTGGTAG AGCAGTGTGG AAATCAGAGG CATCACACCG AGGCAGTAGC AATAATAGGA ATCGAGGTGG TGGTAGAGCA GTGTGGAAAT CAGAGGCATC ACGCCGTGGA GGCAGTATGA GGCAGGTAGC GAGTTGTGCT TTTACACCAG TGGAGCAGCA GATATTTGAA CAAATCGAAC CAATCACAAA GAATGTAAAG AGGATCATCC GTGAATCGAG TGTATGTTCA AACACCGCCC AGGTGGTTCC TTCTGTTGTA TCCCTTACAG TCCATCTCTC TCAATACTTT TGCAGGGAC |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 |
>NRPDA2204 | Oryza sativa (indica cultivar-group) | protein sequence | RNA Polymerase IV Large Subunit
LKAQPVNELE KPIPITHQSQ LLNNPYLGLP LQVGDAIEEC EGHFGFIELP MPIFHPSHVT ELSQILNLIC LRCLKIKNRK GSMLLFPQLA PIKKELEEGF WSFLDQFGSC TRGTSHCRPL LPEEVQNIIK KIPEETRRWL SVRGYIPQDG FILSYLCVPP NCLRVSNVLD GNTFSCSGTS TNLLRKALRK IQQIRGSRIG SSNIQVDQVA DDLQVDVANY INLGGTTKGH GDDTFTSQPT AMQWKQKMKT LFISKSSSFS SRGVITGDPY IGLNVVGVPE EVAKRMSVEE KVTDHNIAQL QDMMNKGLCL TYTDANSITY SLDAGKDNPN KKHTILKVGE IVNRRVFDGD IVFLNRPPST DKHSVEAFYV QVHNDHTIKI NPLICDPLGA DFDDDCVQIF YPRSLSARAE AKELYTVDKQ LVSSHNGKLN FQFKNDFSLA LKIMCGREYS EREANQITNA MFSSGMYPQK PLIGGPYWTF PQILETTKSN AITLADHLDR ESVGALATGT TISSILSTKG PREATEFLNL LQPLLMESLL IDGFSINLGD FTVPSPILEA IQNNPLELNK YREPIMDFIT HSSAIGLLVD PKSDSNMNKV VEQLGFLGPQ LQHNGRLYSS RLVEDCLSKS LHRCCGSTNC CNPLEEHGTV RSSIYHGLNP YEALLHSICE REKIMRASKG LVEPGSLFKN MMSRLRDVTA CYDGSIRTSS GNLVLQFGSR DASNCVTPGD PVGILAATAV ANAAYKAVLA PNQNNIISWD SMKEVLLTRA STKADANHRK VILYLNQCSC ENECMERALT IRACLRRIKL EDCTTEISIK YQQQATQAAH HLVGHIHLDK KQLNQIETIM DSVLHKCQET FRNNIKKKGS MREILKTTLV NILSSIRYLC IWDYHPYFDT SLCDQHTDDD QEFRVSCLQF FLPASITKNI SESTERVIDF MTNAIFPIIL DTVIKGDPRV EEANLVRIEP ESTFWVQSSG AEQKGEVALE ITVEKAAAAE SGNAWGVAMD ACIPVMDLID TTRSMPYDIQ QVRQVFGISS AFEKVTQYLS KSVGMITKSV LQEHLTTVAS SMTCTGDLHG FNNSGYKATC QSLKVQAPFM EATLSRSIQC FEKAAAKAYS DQLGNVVSAC SWGNNTEIGT GSAFEILWND ENMSSSKSIL GGYGLYDFLE AVETTGATKD KAIVPHNYCL YDVDCIPEDK VCLEENNQIT WTDKPKAEFL MESEGRRAGM HSTGQKHPRK PNWHEGNTKS SPNSTAVEFT GQVFQRRQLK TKSNWNSDAT QQDDKKPSWY SSNSAGTQNF TIAGSSRPGE WNRKNNNRGQ GGGRAVWKSE GPHRGGSSSN RNQGGGRAVW KSEASHRGSS NNRNRGGGRA VWKSEASRRG GSMRQVASCA FTPVEQQIFE QIEPITKNVK RIIRESSVCS NTAQVVPSVV SLTVHLSQYF CRD |
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Acknowledgements: ChromDB was funded by a grant from the National Science Foundation Plant Genome Research Project(#DBI-0421679; PI Napoli). ChromDB is funded currently by a Mexican grant to R. Jorgensen via the Consejo Nacional de Ciencia y Tecnología (Conacyt). ChromDB server is hosted by the Biotechnology Computing Facility at the University of Arizona.
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