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EBP903 (Populus trichocarpa) |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501 4561 4621 4681 4741 4801 4861 4921 4981 5041 5101 5161 5221 5281 5341 5401 5461 5521 5581 5641 5701 5761 5821 5881 5941 6001 6061 6121 6181 6241 6301 6361 6421 6481 6541 6601 6661 6721 6781 6841 6901 6961 7021 7081 7141 7201 7261 |
>EBP903 | Populus trichocarpa | genomic sequence | BAH-PHD domain-containing protein group
atactttgaa aactagaagc tctgatttgt ccatggccgt gtagtaaatt gttatgagtg ttggcattag tctaatcttg tcaacacgta cagtatattc ttagcattac aagaaaatgt acaggttctt gtcaccatct agtattttat acagtatctg tgctgtatac cacgcctgca tgtatacttt tttcattaaa aaaatgcata aaaaagctga cgacggtgat gatgtgttct ccaccttgtt tcacaaacac aatccacctc actcactctc tcttacgcgg tccctctcgc tatatgctca ctgtccccaA TTTCTCCCTG CCCCGCCCTA GGGTTTCTTT TCCTTCCACT TCCCTGTCAA ACAAACCTTA ACCCCTAAGA AAACCCCCCT TAGTCCTTAC ACTTTTAACC TCTGTTGATT ATTTTGCTTT GTGTCTCCAG AAATAGAAGT AAAAATCAGC GCTTGGCTAC CAGCTAAAAC CAAGCAATTC ATGGCCAAAA CCAAACCTGG CAAAAAAGAC CTTGATTCTT ACACTATCAA AGGCACCAAC AAAGTTGTTA GACgtaagca tttaccttgt ttaaaaacca taatttctag caacaagctt cttcttgttg ctatacaatt aaaaatccat caatttcttg cttaaagttt ccccttttag accctgattg ccaaaatgtc tccctttttc ctttcaattc ttgaataccc tatcgttttt aactctcgtc tttcattctt tgcttttttt tggcttctga atttgggtgg attcatgctt gttattgcag CTGGTGATTG TGTGTTGATG CGCCCATCGG ATACAGATAA GCTTCCATAC GTGGCACGTA TAGAGAAAAT CGAGGCAGAT CATCGAAACA ACGTTAAAGT TCGTGTACGG TGGTACTACC GGCCGGAGGA ATCCATTGGG GGACGCCGTC AATTCCACGG AGCAAAAGAG TTATTCCTGT CAGACCACTA TGATGTGCAA AGTGCACATA CAATCGAAGG CAAGTGCACA GTGCACTCCT TCAAGAACTA CACTAAGCTT GAAAATGTTG GAGCTGAGGA TTACTTTTGT AGGTTCGAAT ACAAGGCTTC CACTGGTGGT TTCACTCCCG ATCGTGTAGC TGTgtgagtt ccctttcttt gataaaattt tgagttgatt tttctgggtt ttgagtgctg aaatgaatgg ccttttgaat tggtgtcttt gaagGTACTG TAAGTGTGAA ATGCCATACA ATCCGGATGA TCTCATGGTG CAATGCGAGG GATGCAAAGA TTGgtaactt cttgataatg cactcatttc tgtaactagg aatcatgcat tgtaactgca agtttagttt gtttatctca tctgatctct gaaattattg gagctgcatc agtcagaatc aatgtagcat ggcgttgttc ttcatttgaa ttcattgcgt agcttaatga tttgaactta tgatagcttt ttccatttgt ttcattcctc tagtagtatc taattttact ggaacttcaa caaaaactgt gattggtgag agaaatagga attcattcta gagtgtaata gccatttgtc ttttgctttt aagtttatgt gggcttcttt caactctgtt ttatgttggg caaacatttt atcttcatga gagcttaata gggaccagta aagcatatca agcaggcatg agaagtaggt tctatgagat ttatctagtt tcatcaagtt gtaagaggtc attttcttct taatatatcc agtgatggct tcttttggat ttaagctaat accttgtatc ttgtatagaa agtttacttc ctatgcaata atgcttttat ggaactaaag atactttatt taacacactg caggctttat ttagccattc ttaggccata gcttatttgt tctgcaccaa cttcagctgc ctgtaacacg tggggataac cattgagctt tcatgttagt agggttttgt taatcctccc ttttcatttt ccgcacatca ccatgatcct tgcatagttt atcatcttgt tattgttcgt aatttgtttc tgtaagtctt ctcccaattt gccctaaatt gattaatagt tggtagcatt aaacccgtgt gtacttctca tgcatgctta ctacttaaat ggggctcttt gtgtctgatc ctcatagtca tatatgttga aaaatctggg cagaggtgaa tatcttaaac atattttgat tgaaatactg ttctgaaaac acagatatct gttagtgctg gacttttgtg tggttcacat gctgagaatg aactcttagg acatcaaatt agttaatctg tcaagtggat atctcattta tcagttttgt tttccttcaa ccttgaattt gcttggtttt tgagttctta atggttcaat atggtagttt aagcattaag tattaacaat tgaagaagtg aaagatgatt aaagtacaaa agtatcattt taaaagaatt attaagtaat agtggaaagg tcaatacatt tcctaatttt gaagggtgaa agataatatt ccagtttact gcggttatta ttccattggt tgttgaaatt actcagtgac taatttgcat gccaaatttt gctataaatt tcattctttc atttaaggac catgttagaa atttaaagct aagatgggtg aaggaatttg aaattggcat cagttaccgt tgtcctttgt accacagatg gtacaaatca aggttgtaag gctccttaca gataaggaaa aaggggggtg gggtggggag gaaagaagcc aaagaactta tgtgttatac tcttgtacta tcaacatcaa atgaagtatg gggtttagct gtctaatgag aatagtgaat ggtatttaac aattcctttt caaataggca gtaattaaag gatgtagcag gcaatgttga gatgcaatta ggaaactgat attatatagg aggtgattta aaaattcgca aattgtagag tttgcatcgt aaacatgcta taatggggtt tgagagatag tttggacaag aagatcctca ttaggcatcg atgcaatgtc atttactaat gttatcaatg aaaatcatga acatcacatt ttgtagcatc atcaaaagat gattgttgaa tagattgatt ggattttctt tttttgtatt atttctcaat tttgtgttgg tcaaatctgg ttgatcttgt agatagcata tgatacaatg aaaagaatca tttctttgga aataagaact ttctttgcaa ttttatagat gtaagttttg cacttgtaga gatattcaat tcccttcttt gctgtgtatt tggaaatgac tgaaaaactg gatttgatgg ttgagaactt atctaattgt aaaaaatggt atagatttga aggctgttat ggagagaaaa tgaacacctt gtatttgttg tttgaccaga agtgaagaac tcatacaaaa tcaaaccata tacagaactt aatcaaatta aataaataat atctctaaga attccatctc attaagcatt ctgcatgtct gctacgtata gtgttagcca gatatctttc aaagaggtta gagatgattc ttctctctta aatgctcttt tcttgtgttc ctccaagcat attgtaggta catgacacaa ccttttcttt cctatcccac cctctcccaa ctccaagtca atagcgtaac catgaccatg gaaatttcca tggctcattg tgcgaagtcc caaaagctta cccatccagt gcaataattg atttacagtt tagggtgttg ttatccagaa aaaagaatga ttccatgcta agatcatctc ttcttttgaa gatcattaat aattgaactt cttccccaaa tagcctccat aggcaaaaat ggggaaataa gagcttcggg aggagatatg aacttctaca gtgttaaaca aattaaatta ggcattggat atgacacaca acaggatttg atactgaagt tgccatttta gctgatctgt atctagcttc atttttattt agttctttgg tcttaatggt atcaaccagc ttggttttgg ttgtagggag gttcaatatg ctaatcctgt gctatcatat gatgaacacc actttcaatt aatgctatta tcaatgatgt ctaagcagga gcttatcaag ataattttta tctgcagtca tctctaaaag ttcatgagtt gattggtctg tgagaagaga gaactatcta tgttgtttag ttgtacggtt tttgttggta ttccactgct tgttggtttt ataatatttt atgtactacg cacgatttat gttacgtgtg ttttcttgta aattcaaggg ttattgcttc ctgatcattt ttaactaatg tgctgcagGT TTCATCCTTC TTGTATGGGT ATGACAATTG AAGAAGCCAA AAAATCAGAT CACTTTCTGT GCTCCGACTG CTCATCTGAT GATGATGCAA AAAGATCTTT GAATGTATTC CCAGTATCAC CATCACTTGA GGTTAAGgta agaatgtact ccagttgttt caatctcatt aaggaaacta aaatcagttt agctgtgcag caacatcttt tactgcaatt tatgtgtatc attatgaata ctaccactgc taggtttctt aagctggcgc tatttagata ttgactaatt accattatat cttgaagatg taggatcacc cttaccttat tggcttgtcg acatggtgtg agctttcaga gtctttgccc cctttctctc atataagctg atacaaatta cataactgtc cctttaaggc tacttttaag ctaattctta caattatgga agtctgtgcc acacgttttc atatgttttc ttgatagtgc aatgttcatt ctataatata tcacaattct ctgccctggg tttaattaat tgtgcatgag agtttttgtg caatttttct gccttctatt atgtgggcat agctagtagt agtatttaat gcatgtgcag ttatttctca tatggttggg tataatagaa aatagctatg aggcacaata gtttgcagtc aaaatgtttg gtgcgagccc ttctacaaaa agcaaaaagc aaaaagcagg cagtgttgcc aaagaaaaaa ctacaaaccc atggttttat tgtttagtct atcatgggat ggtagtcact gtccattcga ttgacatgcc taaagctctt taaaatttga tcttaaaaac tgcccttaat gatttataag tactcataga catgcctgaa gttcttcctc aaatgttttc ttggccttag gctgcagttt acctttatta aaaagttaga aaaaagatat ggagagagag agagagactg taatgggttg aaaatggatt atgttaagtt ggaactgcct gcttgaccat tattggtttc cattgatggg gtatggaatg ttgtatctta acctggaggt ctgtcaacca aaccgattgt agtaccatga gaaaaatgat cttaacttca agcgtacatc gttgaattgc tgtgattcta tcagtaacaa cctacagaaa actaaaattt atctcataat caggcagcgt taattttcct aggattttcg ttctagtttt aacaaggatt ccagctgatg ctgcttgctg cataagtggg ctgagtagac agaagcttta tgagttttat gtttcattat ctccaaggaa aaggtagtca acaaaaataa ttcatgcctg attaatgttg ataagagaat gctagtttag agggagagtt gctggtgtaa cttgtatgtt ttttagctgc aatagaatca gatctattag gatattttga agtgctacct aaaaagtgga ctatggatgt taataatcaa gggtatatgg gttcctctgc atttttgtgg aattctaatt catgaaaaga aagttttttg aaggaaaaat gatattccct tgttaaaaat catagttaca tgggatgggt tatttcaagt gatgaaacca ttgcagagct atcacagtaa agctgtcata accaattgat gtgttaaggc tgtaagatgt gacttcttaa agttcaggtg agaaggaaac gaggcatctt gattaaaaga tatgtggtct tactgaatat ctttggtcgt tagcaatttg tttcactggt tgtctttgct cgttctcact cataaccatg caaactggaa tcttctttat tattttctac cctttctgat gtagttgtct ttgattttta tgctagGTGG AGACAAAACG CAGGAAGAGA TGACTGAAGT TGCGGTGCAT AACAAAGGGT TAGTAAATGT TCTTGCACTA GCTCCACCAT CGCTGTCATC CCTGCTGGGT TATGTTATGG AATTGTACAG TGCAGAGAAG ATATCGTGCT TGCACAAACA AGAGGCATTT TATTAATTAT CATGTTCCAG TGTTTGTATG TGTGAATGGA CTTGGGAGAT GGTTTTGTGA TCATTGATGT CCTTGCGAGT CTCTGCCAAA AAAAAAAGCA GCCCCATAAG TACCTACCAC GACAGTGAAA TGAAAATTTA GAGAACTTTT AGATTTTCAT GTGATATTCT GCAACTGTCA TGATAGCAAT GTTCTTTGTT CTTTTTTTTT TCTTTTTTTT TAATAAGAAA GGGGATATAA AAGTAGATAA GATCGGAGCT GAGCAAGAGC TTTGATGGAA TCTCCTGGTT GAAGCAAATC ACAAGAGGGT CTGCCGTTCT TTTTATAGGT TCTGTAGTAG ATTCCCTTGT CAAATTTGGA ATGATTTGTT TCATATACTT TTGGACTTTA TCCTTCCTGA TCTGAAAACA TTGAGGTTAA ATACCAATAG CCTTCAACAA GCAAGAAAAG AGGGGAGAGA TTATATATAA CCAGCTGGAA Aattttcata aactgtttat tgagaaagct tacatctggg aagttggatt caccaaagaa aagtatgatg ctgtcaccag aactttctag aataggatac gtagcagtaa cagttttaac taagataacc ttaacaaaag aatttagatt tacccattat atttatgatc tagatcatga ataatttaat aaaaaacaat tcaaaataaa gtaattcaaa ataaagtata aagtataatt ttttattaaa ccattgaaaa aaaataataa aaaataatct aaattaattt agataaactt attaaacttg aatattaaat gttg |
Transcript Splice Model
320-573 |
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1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 |
>EBP903 | Populus trichocarpa | transcript sequence | BAH-PHD domain-containing protein group
ATTTCTCCCT GCCCCGCCCT AGGGTTTCTT TTCCTTCCAC TTCCCTGTCA AACAAACCTT AACCCCTAAG AAAACCCCCC TTAGTCCTTA CACTTTTAAC CTCTGTTGAT TATTTTGCTT TGTGTCTCCA GAAATAGAAG TAAAAATCAG CGCTTGGCTA CCAGCTAAAA CCAAGCAATT CATGGCCAAA ACCAAACCTG GCAAAAAAGA CCTTGATTCT TACACTATCA AAGGCACCAA CAAAGTTGTT AGACCTGGTG ATTGTGTGTT GATGCGCCCA TCGGATACAG ATAAGCTTCC ATACGTGGCA CGTATAGAGA AAATCGAGGC AGATCATCGA AACAACGTTA AAGTTCGTGT ACGGTGGTAC TACCGGCCGG AGGAATCCAT TGGGGGACGC CGTCAATTCC ACGGAGCAAA AGAGTTATTC CTGTCAGACC ACTATGATGT GCAAAGTGCA CATACAATCG AAGGCAAGTG CACAGTGCAC TCCTTCAAGA ACTACACTAA GCTTGAAAAT GTTGGAGCTG AGGATTACTT TTGTAGGTTC GAATACAAGG CTTCCACTGG TGGTTTCACT CCCGATCGTG TAGCTGTGTA CTGTAAGTGT GAAATGCCAT ACAATCCGGA TGATCTCATG GTGCAATGCG AGGGATGCAA AGATTGGTTT CATCCTTCTT GTATGGGTAT GACAATTGAA GAAGCCAAAA AATCAGATCA CTTTCTGTGC TCCGACTGCT CATCTGATGA TGATGCAAAA AGATCTTTGA ATGTATTCCC AGTATCACCA TCACTTGAGG TTAAGGTGGA GACAAAACGC AGGAAGAGAT GACTGAAGTT GCGGTGCATA ACAAAGGGTT AGTAAATGTT CTTGCACTAG CTCCACCATC GCTGTCATCC CTGCTGGGTT ATGTTATGGA ATTGTACAGT GCAGAGAAGA TATCGTGCTT GCACAAACAA GAGGCATTTT ATTAATTATC ATGTTCCAGT GTTTGTATGT GTGAATGGAC TTGGGAGATG GTTTTGTGAT CATTGATGTC CTTGCGAGTC TCTGCCAAAA AAAAAAGCAG CCCCATAAGT ACCTACCACG ACAGTGAAAT GAAAATTTAG AGAACTTTTA GATTTTCATG TGATATTCTG CAACTGTCAT GATAGCAATG TTCTTTGTTC TTTTTTTTTT CTTTTTTTTT AATAAGAAAG GGGATATAAA AGTAGATAAG ATCGGAGCTG AGCAAGAGCT TTGATGGAAT CTCCTGGTTG AAGCAAATCA CAAGAGGGTC TGCCGTTCTT TTTATAGGTT CTGTAGTAGA TTCCCTTGTC AAATTTGGAA TGATTTGTTT CATATACTTT TGGACTTTAT CCTTCCTGAT CTGAAAACAT TGAGGTTAAA TACCAATAGC CTTCAACAAG CAAGAAAAGA GGGGAGAGAT TATATATAAC CAGCTGGAAA |
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1 61 121 181 241 301 361 421 481 541 601 |
>EBP903 | Populus trichocarpa | orf sequence | BAH-PHD domain-containing protein group
ATGGCCAAAA CCAAACCTGG CAAAAAAGAC CTTGATTCTT ACACTATCAA AGGCACCAAC AAAGTTGTTA GACCTGGTGA TTGTGTGTTG ATGCGCCCAT CGGATACAGA TAAGCTTCCA TACGTGGCAC GTATAGAGAA AATCGAGGCA GATCATCGAA ACAACGTTAA AGTTCGTGTA CGGTGGTACT ACCGGCCGGA GGAATCCATT GGGGGACGCC GTCAATTCCA CGGAGCAAAA GAGTTATTCC TGTCAGACCA CTATGATGTG CAAAGTGCAC ATACAATCGA AGGCAAGTGC ACAGTGCACT CCTTCAAGAA CTACACTAAG CTTGAAAATG TTGGAGCTGA GGATTACTTT TGTAGGTTCG AATACAAGGC TTCCACTGGT GGTTTCACTC CCGATCGTGT AGCTGTGTAC TGTAAGTGTG AAATGCCATA CAATCCGGAT GATCTCATGG TGCAATGCGA GGGATGCAAA GATTGGTTTC ATCCTTCTTG TATGGGTATG ACAATTGAAG AAGCCAAAAA ATCAGATCAC TTTCTGTGCT CCGACTGCTC ATCTGATGAT GATGCAAAAA GATCTTTGAA TGTATTCCCA GTATCACCAT CACTTGAGGT TAAGGTGGAG ACAAAACGCA GGAAGAGATG A |
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1 61 121 181 |
>EBP903 | Populus trichocarpa | protein sequence | BAH-PHD domain-containing protein group
MAKTKPGKKD LDSYTIKGTN KVVRPGDCVL MRPSDTDKLP YVARIEKIEA DHRNNVKVRV RWYYRPEESI GGRRQFHGAK ELFLSDHYDV QSAHTIEGKC TVHSFKNYTK LENVGAEDYF CRFEYKASTG GFTPDRVAVY CKCEMPYNPD DLMVQCEGCK DWFHPSCMGM TIEEAKKSDH FLCSDCSSDD DAKRSLNVFP VSPSLEVKVE TKRRKR |
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Acknowledgements: ChromDB was funded by a grant from the National Science Foundation Plant Genome Research Project(#DBI-0421679; PI Napoli). ChromDB is funded currently by a Mexican grant to R. Jorgensen via the Consejo Nacional de Ciencia y Tecnología (Conacyt). ChromDB server is hosted by the Biotechnology Computing Facility at the University of Arizona.
Design by Western Sky Communications