Home
Help
About Us
All Names
ChromDB ID
Formal Name
Synonyms
Entrez GeneID
Locus
NCBI Accession
Organism
Protein Class
Text Search
GO Number
Database updated:
15Jun13
Search Tools
ChromDB Contents
Advanced Search
BLAST ChromDB
Sequence Tools
Form FASTA Files by
Sequence
Domain
Organisms
Genomic-Based
Arabidopsis thaliana
Oryza sativa ssp. japonica
Populus trichocarpa
Zea mays
   
And more...
Transcript-Based
Triticum aestivum
Hordeum vulgare
Homo sapiens
Saccharomyces cerevisiae
Drosophila melanagogaster
   
And more...
Tutorials
Getting Started
ChromDB Identifiers
Pfam Viewer
Viewers
Exon Viewer
Pfam Domain Viewer
SMART Domain Viewer
Reports
Genomic-based Reports
Protein-based Reports
Loci
Synonyms
Protein Group Counts
Organism Information
Protein Group Information
Arabidopsis Paralogons
RNAi
Vector Information
Order Vectors
RNAi Lines
Extras
Chromatin For Beginners
Archive
About Us
External Links
Help
Select both the taxon and protein classification or
Enter ChromDB IDs and locus numbers
1. Select a taxon (or
Select an organism
)
  
+
Eukaryotes
  
+
Viridiplantae
  
+
Streptophyta
  
+
Streptophytina
  
+
Embryophyta
  
+
Bryophyta (mosses)
Funariales
Sphagnales
  
+
Lycopodiophyta (club mosses)
Lycopodiaceae
Selaginellaceae
  
+
Euphyllophyta
  
+
Spermatophyta
  
+
Magnoliophyta (flowering plants)
  
+
Liliopsida (monocotyledons)
Acorales
  
+
Asparagales
Agapanthoideae
Amaryllidaceae
Hyacintheae
Orchidaceae
Asparagoideae
  
+
Liliales
Liliaceae
  
+
commelinids
Poales
  
+
Zingiberales
Musaceae
Arecales
  
+
Eudicotyledons
  
+
Ranunculales
Papaveraceae
Ranunculaceae
  
+
Core eudicotyledons
  
+
Rosids
  
+
Eurosids II
  
+
Malvales
Malvaceae
  
+
Malvids
  
+
Myrtales
Myrtaceae
Sapindales
  
+
Brassicales
Brassicaceae
Caricaceae
  
+
Eurosids I
Fagales
  
+
Rosales
Fragariinae
Amygdaleae
Maleae
Cucurbitales
  
+
Malpighiales
Saliceae
Euphorbiaceae
Linaceae
  
+
Fabaceae (legumes)
Papilionoideae
  
+
Asterids
  
+
Euasterids II (campanulids)
Apiales
Asterales
  
+
Euasterids I (lamiids)
Gentianales
Lamiales
Solanales
  
+
Caryophyllales
Amaranthaceae
Aizoaceae
Caryophyllaceae
Vitales
  
+
Magnoliales
Magnoliaceae
  
+
basal Magnoliophyta
  
+
Amborellales
Amborellaceae
  
+
Gymnosperms
  
+
Gnetophyta
Gnetales
  
+
Cycadophyta
  
+
Cycadales
Cycadaceae
  
+
Coniferophyta
  
+
Coniferales
Pinaceae
Cupressaceae
  
+
Monilophytes (ferns)
  
+
Polypodiopsida
Polypodiales
  
+
Charophycean algae
Prasinophyceae
Chlorophyceae
  
+
Protozoa
Choanoflagellida
Apicomplexans
Alveolata
Amoebozoa
  
+
Opisthokonts
  
+
Fungi
  
+
Dikarya
  
+
Ascomycota
  
+
Pezizomycotina
Eurotiomycetes
Sordariomycetes
Leotiomycetes
Pezizomycetes
Saccharomycotina
Taphrinomycotina
  
+
Basidiomycota
Pucciniomycotina
Agaricomycotina
Ustilaginomycotina
Chytridiomycota
  
+
Animals
Placozoa
  
+
Bilateria
  
+
Protostomia
Nematoda
Arthropoda
Annelida
  
+
Deuterostomia
Echinodermata
  
+
Chordata
Enterogona
  
+
Gnathostomata
Aves
Amphibia
Osteichthyes
Mammalia
Rhodophyta (Red Algae)
  
+
Chromalveolates
Haptophyta
  
+
Heterokonts
Oomycetes
Chrysophyta
Phaeophyta
2. Select a protein group (hold Ctl to select multiple) (or
Select Classification
)
All
ABHF: Alpha_Beta Hydrolase Fold Super Family
AGO: Argonaute gene family
ARID: ARID/BRIGHT DNA binding domain group
ARP: Actin superfamily; actin-related proteins
BRAT: Bromodomain-containing proteins containing AAA ATPase domains
BRD: Diverse bromodomain-containing proteins (polybromo1, yeast RSC, and human BRD homologs)
BRWD: Bromodomain-containing proteins containing WD40 domain repeats
CDPK: Cyclin-dependent protein kinase
CHB: SWI/SNF and RSC chromatin remodeling complex proteins (Swi3 and Rsc8 homologs)
CHC: SWI/SNF and RSC chromatin remodeling complex proteins (Swp73 and Rsc6 homologs)
CHE: SWI/SNF chromatin remodeling complex proteins (Snf5 homologs)
CHR: SNF2 super family (Snf2, Ris1, Rad26 superclasses)
CONS: Flowering control-associated proteins; CONSTANS group
CPC: Condensin complex component; SMC protein group
CPD: Condensin complex component, non-SMC subunit (Cnd1 homologs)
CPG: Condensin complex component, non-SMC subunit
CPH: Condensin complex component; Barren domain-containing, non-SMC subunit
CPuORF: Conserved Peptide Upstream Open Reading Frame (CPuORF) Transcripts
CRD: Diverse group of chromodomain-containing proteins
CYCA: Cyclin family protein group A
DCL: Dicer-Like group
DKSB: DEK_C N Terminal Domain Proteins
DMT: DNA methyltransferases
DNG: Superfamily of DNA glycosylases
DOTS: Nucleosomal histone H3-Lys79 methylase (Dot1 homologs)
DRB: Double stranded RNA-Binding protein group
DRSH: Animal-specific class II Ribonuclease III proteins (Drosho homologs)
EBP: BAH-PHD domain-containing protein group
ELF: Transcription Elongation Factor (Elf1 homologs)
EPL: Enhancer of Polycomb-like protein group [E(Pc) homologs]
ERI: Enhanced RNA interference
FGP: Flowering control-associated proteins; FRIGIDA group
FLCP: Flowering control-associated proteins
FLT: Flowering control-associated proteins; FLT group
FSHAT: Fungal-specific histone acetyltransferase
GTA: Transcription elongation-nucleosome displacement proteins (Spt5 homologs)
GTB: Transcription elongation-nucleosome displacement proteins (Spt6 homologs)
GTC: Global transcription factor group C (Spt16 homologs)
GTD: Global transcription factor group C (Spt3 homologs)
GTE: Global transcription factor group E (Bdf1, BRD4 and BRD2 (RING3) homologs)
GTG: Transcription elongation-nucleosome displacement proteins (Spt4 homologs)
GTI: Global transcription factor group I (Spt2 homologs)
HAC: Histone acetyltransferases [CREBBP (CBP) family]
HAF: TATA Box Binding Protein Associated Factors (TAF1 Homologs)
HAG: Histone acetyltransferases (GNAT superfamily)
HAM: Histone acetyltransferases (MYST family)
HCP: Sin3 complex components (SAP18 homologs)
HDA: Histone deacetylases (Rpd3/HDA1 superfamily)
HDHD: Haloacid dehalogenase-like hydrolase domain-containing protein
HDMA: Histone demethylases (AOF2/ LSD1 homologs)
HDT: Histone deacetylases (plant-specific HD2 family)
HEN: HUA Enhancer
HFO: Histone H4
HIRA: HIRA protein group
HMGA: High Mobility Group Family A
HMGB: High Mobility Group Family B
HMTA: Set1 complex component (Ash2/Bre2 homologs)
HON: Histone H1 linker protein
HSC: Histone chaperone for Htz1p/H2A-H2B dimer
HTA: Histone H2A Family
HTB: Histone H2B
HTR: Histone H3 Family
HUPA: Histone ubiquitination proteins group A (Bre1 homologs)
HUPB: Histone ubiquitination proteins group B (Rad6 homologs)
HXA: Histone acetyltransferase complex component (Ada2 homologs)
HXB: Histone acetyltransferase complex component (Ada3 homologs)
INGF: Inhibitor of Growth protein group (ING1-5 homologs)
JMJ: Jumonji domain group
KELP: KELP Protein Group
LFY: Flowering control-associated proteins; LFY group
MBD: Methyl binding domain proteins
MBTI: MADS-box Type I group
MED10SUB: Mediator of RNA polymerase II transcription subunit 10
MED11SUB: Mediator of RNA polymerase II transcription subunit 11
MED12SUB: Mediator of RNA polymerase II transcription subunit 12
MED13SUB: Mediator of RNA polymerase II transcription subunit 13
MED14SUB: Mediator of RNA polymerase II transcription subunit 14
MED15SUB: Mediator of RNA polymerase II transcription subunit 15
MED16SUB: Mediator of RNA polymerase II transcription subunit 16
MED17SUB: Mediator of RNA polymerase II transcription subunit 17
MED18SUB: Mediator of RNA polymerase II transcription subunit 18
MED19SUB: Mediator of RNA polymerase II transcription subunit 19
MED1SUB: Mediator of RNA polymerase II transcription subunit 1
MED20SUB: Mediator of RNA polymerase II transcription subunit 20
MED21SUB: Mediator of RNA polymerase II transcription subunit 21
MED22SUB: Mediator of RNA polymerase II transcription subunit 22
MED23SUB: Mediator of RNA polymerase II transcription subunit 23
MED24SUB: Mediator of RNA polymerase II transcription subunit 24
MED25SUB: Mediator of RNA polymerase II transcription subunit 25
MED26SUB: Mediator of RNA polymerase II transcription subunit 26
MED27SUB: Mediator of RNA polymerase II transcription subunit 27
MED28SUB: Mediator of RNA polymerase II transcription subunit 28
MED29SUB: Mediator of RNA polymerase II transcription subunit 29
MED2SUB: Mediator of RNA polymerase II transcription subunit 2
MED30SUB: Mediator of RNA polymerase II transcription subunit 30
MED31SUB: Mediator of RNA polymerase II transcription subunit 31
MED3SUB: Mediator of RNA polymerase II transcription subunit 3
MED4SUB: Mediator of RNA polymerase II transcription subunit 4
MED5SUB: Mediator of RNA polymerase II transcription subunit 5
MED6SUB: Mediator of RNA polymerase II transcription subunit 6
MED7SUB: Mediator of RNA polymerase II transcription subunit 7
MED8SUB: Mediator of RNA polymerase II transcription subunit 8
MED9SUB: Mediator of RNA polymerase II transcription subunit 9
MOAA: CPuORF HG1; mORF: S1-group bZIP transcriptiion factor
MOAB: CPuORF HG2; mORF: bHLH transcription factor, LHW subfamily
MOAC: CPuORF HG3; mORF: S-adenosylmethionine decarboxylase
MOAD: CPuORF HG4; mORF: MADS-box, MIKC-C type, transcription factor
MOAE: CPuORF HG5; mORF: Ankyrin repeats protein
MOAF: CPuORF HG6; mORF: Polyamine oxidase
MOAG: CPuORF HG7; mORF: Translation initiation factor eIF5
MOAH: CPuORF HG8; mORF: TGF-beta superfamily; Mic-1 (GDF15) putative ortholog
MOAI: CPuORF HG9; mORF: Cysteine-rich protein
MOAJ: CPuORF HG10; mORF: MAP kinase, PPC family 4.5.1
MOAL: CPuORF HG12; mORF = unknown protein
MOAM: CPuORF HG13; mORF: Phosphoethanolamine N-methyltransferase
MOAN: CPuORF HG14; mORF: HDZip class I transcription factors
MOAO: CPuORF HG15; mORF: bHLH transcription factors, SAC51 subfamily
MOAP: CPuORF HG16; mORF: MAP kinase, PPC family 4.1.5, WNK5 subfamily
MOAR: CPuORF HG18; mORF: HSF-like transcription factor TBF1/HsfB1
MOAS: CPuORF HG19; mORF: Histidine-rich protein HIRP1
MOAT: CPuORF HG20; mORF: Unknown protein
MOAU: CPuORF HG21; mORF: ERF/CRF-type AP2 transcription factor
MOAV: CPuORF HG22; mORF: Ubiquitin-specific protease family, C19-related